RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 TRIM17Q9Y577 477 aa15.56■□□□□ 0.08
VPS26A-205ENST00000489656 PHLPP2Q6ZVD8 1323 aa15.56■□□□□ 0.08
VPS26A-205ENST00000489656 ANK1P16157 1881 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 A0A1B0GTH6 734 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 DENND3A2RUS2 1198 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 MBLAC1A4D2B0 266 aaPredicted RBP15.55■□□□□ 0.08
VPS26A-205ENST00000489656 SERPINC1P01008 464 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 SMIM10L2AP0DMW4 78 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 SMIM10L2BP0DMW5 78 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 RPL13P26373 211 aaKnown RBP15.55■□□□□ 0.08
VPS26A-205ENST00000489656 UBASH3AP57075 661 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 ADAM17P78536 824 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 LAMTOR4Q0VGL1 99 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 KRT31Q15323 416 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 HSP90AA4PQ58FG1 418 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 GNASQ5JWF2 1037 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 MARCH8Q5T0T0 291 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 LRRC71Q8N4P6 559 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 CNOT6LQ96LI5 555 aaKnown RBP15.55■□□□□ 0.08
VPS26A-205ENST00000489656 NFKBIZQ9BYH8 718 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 XPO4Q9C0E2 1151 aaKnown RBP15.55■□□□□ 0.08
VPS26A-205ENST00000489656 SUCLA2Q9P2R7 463 aaPredicted RBP15.55■□□□□ 0.08
VPS26A-205ENST00000489656 MAGEC2Q9UBF1 373 aaPredicted RBP15.55■□□□□ 0.08
VPS26A-205ENST00000489656 TSKSQ9UJT2 592 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 PTCH2Q9Y6C5 1203 aa15.55■□□□□ 0.08
VPS26A-205ENST00000489656 CETN3O15182 167 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 SLC16A3O15427 465 aaKnown RBP15.54■□□□□ 0.08
VPS26A-205ENST00000489656 PIGRP01833 764 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 NR3C1P04150 777 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 TPM3P06753 285 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 NR2F2P24468 414 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 TMOD1P28289 359 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 EFNA5P52803 228 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 COPB1P53618 953 aaKnown RBP15.54■□□□□ 0.08
VPS26A-205ENST00000489656 IGBP1P78318 339 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 ADAM9Q13443 819 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 TFDP1Q14186 410 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 NR1I3Q14994 352 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 CCSAPQ6IQ19 270 aaPredicted RBP15.54■□□□□ 0.08
VPS26A-205ENST00000489656 TAS1R3Q7RTX0 852 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 KSR1Q8IVT5 923 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 SYCP3Q8IZU3 236 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 DEPTORQ8TB45 409 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 LMBR1Q8WVP7 490 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 KIFC3Q9BVG8 833 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 C2orf40Q9H1Z8 148 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 SUGCTQ9HAC7 445 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 HMX1Q9NP08 348 aaPredicted RBP15.54■□□□□ 0.08
VPS26A-205ENST00000489656 AGPAT3Q9NRZ7 376 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 DMAC2Q9NW81 257 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 PTPN22Q9Y2R2 807 aa15.54■□□□□ 0.08
VPS26A-205ENST00000489656 LRRIQ4A6NIV6 560 aa15.53■□□□□ 0.08
VPS26A-205ENST00000489656 PGK1P00558 417 aa15.53■□□□□ 0.08
VPS26A-205ENST00000489656 CLCN3P51790 818 aa15.53■□□□□ 0.08
VPS26A-205ENST00000489656 FILIP1LQ4L180 1135 aa15.53■□□□□ 0.08
VPS26A-205ENST00000489656 METTL13Q8N6R0 699 aa15.53■□□□□ 0.08
VPS26A-205ENST00000489656 PCSK9Q8NBP7 692 aaKnown RBP15.53■□□□□ 0.08
VPS26A-205ENST00000489656 NAP1L5Q96NT1 182 aaPredicted RBP15.53■□□□□ 0.08
VPS26A-205ENST00000489656 MKNK1Q9BUB5 465 aa15.53■□□□□ 0.08
VPS26A-205ENST00000489656 CCDC113Q9H0I3 377 aa15.53■□□□□ 0.08
VPS26A-205ENST00000489656 SETD4Q9NVD3 440 aa15.53■□□□□ 0.08
VPS26A-205ENST00000489656 CENPFP49454 3210 aa15.53■□□□□ 0.08
VPS26A-205ENST00000489656 CITO14578 2027 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 SMIM35A0A1B0GVV1 85 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 GNAT1P11488 350 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 CDC42EP1Q00587 391 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 NFRKBQ6P4R8 1299 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 FRMD5Q7Z6J6 570 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 SESTD1Q86VW0 696 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 ZBTB8OSQ8IWT0 167 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 MAP7D2Q96T17 732 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 TUBGCP2Q9BSJ2 902 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 INTS13Q9NVM9 706 aa15.52■□□□□ 0.08
VPS26A-205ENST00000489656 RALGAPA2Q2PPJ7 1873 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 K7ERI5 159 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 CLIC2O15247 247 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 MAPK13O15264 365 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 CABYRO75952 493 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 MTIF2P46199 727 aaKnown RBP15.51■□□□□ 0.07
VPS26A-205ENST00000489656 PTENP60484 403 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 STRN3Q13033 797 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 MAN2A1Q16706 1144 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 LHX8Q68G74 356 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 RNF180Q86T96 592 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 ZNF410Q86VK4 478 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 KIAA0319LQ8IZA0 1049 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 ZNF710Q8N1W2 664 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 RNF149Q8NC42 400 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 TSEN34Q9BSV6 310 aaKnown RBP15.51■□□□□ 0.07
VPS26A-205ENST00000489656 IKZF4Q9H2S9 585 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 METTL14Q9HCE5 456 aaKnown RBP15.51■□□□□ 0.07
VPS26A-205ENST00000489656 STYXL1Q9Y6J8 313 aa15.51■□□□□ 0.07
VPS26A-205ENST00000489656 C17orf102A2RUQ5 167 aa15.5■□□□□ 0.07
VPS26A-205ENST00000489656 MOXD2PA6NHM9 499 aa15.5■□□□□ 0.07
VPS26A-205ENST00000489656 LGALS16A8MUM7 142 aa15.5■□□□□ 0.07
VPS26A-205ENST00000489656 N4BP3O15049 544 aa15.5■□□□□ 0.07
VPS26A-205ENST00000489656 ASGR1P07306 291 aa15.5■□□□□ 0.07
VPS26A-205ENST00000489656 TPM2P07951 284 aa15.5■□□□□ 0.07
VPS26A-205ENST00000489656 EPB41P11171 864 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms