RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 CCDC192P0DO97 292 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 NMT1P30419 496 aaKnown RBP15.29■□□□□ 0.04
C9orf3-221ENST00000489562 NLRP12P59046 1061 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 GTF2BQ00403 316 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 STK4Q13043 487 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 STX1AQ16623 288 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 KIZQ2M2Z5 673 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 EPM2AIP1Q7L775 607 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-221ENST00000489562 KSR1Q8IVT5 923 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 MLKLQ8NB16 471 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 KIAA0895Q8NCT3 520 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 WNT8BQ93098 351 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 FDXACB1Q9BRP7 624 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-221ENST00000489562 STRA6Q9BX79 667 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 IFT122Q9HBG6 1241 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 SLC39A2Q9NP94 309 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 ANO10Q9NW15 660 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 TBC1D7Q9P0N9 293 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 DACH1Q9UI36 760 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 CDY2AQ9Y6F7 541 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 SQORQ9Y6N5 450 aa15.29■□□□□ 0.04
C9orf3-221ENST00000489562 ADGRA3Q8IWK6 1321 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 SYCE3A1L190 88 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 DENND3A2RUS2 1198 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 K7ERI5 159 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 PARNO95453 639 aaKnown RBP15.28■□□□□ 0.04
C9orf3-221ENST00000489562 CKBP12277 381 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 DARSP14868 501 aaKnown RBP15.28■□□□□ 0.04
C9orf3-221ENST00000489562 EIF4BP23588 611 aaKnown RBP15.28■□□□□ 0.04
C9orf3-221ENST00000489562 MGAT3Q09327 533 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 TMEM62Q0P6H9 643 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 FAAP100Q0VG06 881 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 STRN3Q13033 797 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 MAPK6Q16659 721 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 BMT2Q1RMZ1 405 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 CT47A1Q5JQC4 288 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-221ENST00000489562 FAM43BQ6ZT52 329 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-221ENST00000489562 MYOCDQ8IZQ8 938 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 GUF1Q8N442 669 aaKnown RBP15.28■□□□□ 0.04
C9orf3-221ENST00000489562 USP38Q8NB14 1042 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 ZNF507Q8TCN5 953 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 PRIMPOLQ96LW4 560 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 HTATIP2Q9BUP3 242 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 TMEM206Q9H813 350 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 PRMT7Q9NVM4 692 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-221ENST00000489562 EXOC7Q9UPT5 735 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 GDAQ9Y2T3 454 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 BRCA2P51587 3418 aa15.28■□□□□ 0.04
C9orf3-221ENST00000489562 INO80B-WBP1J3KQ70 363 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 PSMA7O14818 248 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 MYBP10242 640 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 SELPP16109 830 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 SFPQP23246 707 aaKnown RBP eCLIP15.27■□□□□ 0.04
C9orf3-221ENST00000489562 TYRO3Q06418 890 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 FAM187BQ17R55 369 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 L1TD1Q5T7N2 865 aaKnown RBP15.27■□□□□ 0.04
C9orf3-221ENST00000489562 ZNF618Q5T7W0 954 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 HPS3Q969F9 1004 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 ACCSQ96QU6 501 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 OSMRQ99650 979 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 KIFC3Q9BVG8 833 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 NOC4LQ9BVI4 516 aaKnown RBP15.27■□□□□ 0.04
C9orf3-221ENST00000489562 CCDC113Q9H0I3 377 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 HIPK3Q9H422 1215 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 TBX21Q9UL17 535 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 TBX20Q9UMR3 447 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 GINS2Q9Y248 185 aa15.27■□□□□ 0.04
C9orf3-221ENST00000489562 CAVIN2O95810 425 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 CHRNA1P02708 482 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 PRKCBP05771 671 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 CTSHP09668 335 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 BMP6P22004 513 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 CASP5P51878 434 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 MBTD1Q05BQ5 628 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 ISM2Q6H9L7 571 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 LRRC8DQ7L1W4 858 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 MAP4K3Q8IVH8 894 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 ADSSL1Q8N142 457 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 SCFD1Q8WVM8 642 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 DHTKD1Q96HY7 919 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-221ENST00000489562 PPP1R16BQ96T49 567 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 FGFBP2Q9BYJ0 223 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 FZD8Q9H461 694 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 TMEM39AQ9NV64 488 aa15.26■□□□□ 0.03
C9orf3-221ENST00000489562 DNAH12Q6ZR08 3092 aa15.25■□□□□ 0.03
C9orf3-221ENST00000489562 ACKR2O00590 384 aa15.25■□□□□ 0.03
C9orf3-221ENST00000489562 KIAA0355O15063 1070 aa15.25■□□□□ 0.03
C9orf3-221ENST00000489562 ERLIN2O94905 339 aa15.25■□□□□ 0.03
C9orf3-221ENST00000489562 PRPF6O94906 941 aaKnown RBP15.25■□□□□ 0.03
C9orf3-221ENST00000489562 PIGRP01833 764 aa15.25■□□□□ 0.03
C9orf3-221ENST00000489562 PRCPP42785 496 aa15.25■□□□□ 0.03
C9orf3-221ENST00000489562 SNRPFP62306 86 aaKnown RBP15.25■□□□□ 0.03
C9orf3-221ENST00000489562 NCBP1Q09161 790 aaKnown RBP15.25■□□□□ 0.03
C9orf3-221ENST00000489562 KNOP1Q1ED39 458 aaKnown RBP15.25■□□□□ 0.03
C9orf3-221ENST00000489562 DPCR1Q3MIW9 517 aa15.25■□□□□ 0.03
C9orf3-221ENST00000489562 ZC2HC1CQ53FD0 456 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-221ENST00000489562 FOXR2Q6PJQ5 311 aa15.25■□□□□ 0.03
C9orf3-221ENST00000489562 TRAF7Q6Q0C0 670 aa15.25■□□□□ 0.03
C9orf3-221ENST00000489562 SMYD4Q8IYR2 804 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms