RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 FBXO18Q8NFZ0 1043 aa25.65■■□□□ 1.7
COL9A3-213ENST00000489045 MRPS27Q92552 414 aaKnown RBP25.65■■□□□ 1.7
COL9A3-213ENST00000489045 KHSRPQ92945 711 aaKnown RBP eCLIP25.65■■□□□ 1.7
COL9A3-213ENST00000489045 LPPQ93052 612 aa25.65■■□□□ 1.7
COL9A3-213ENST00000489045 MRPL9Q9BYD2 267 aaKnown RBP25.65■■□□□ 1.7
COL9A3-213ENST00000489045 FOXP1Q9H334 677 aaPredicted RBP25.65■■□□□ 1.7
COL9A3-213ENST00000489045 ANKEF1Q9NU02 776 aa25.65■■□□□ 1.7
COL9A3-213ENST00000489045 LZTS1Q9Y250 596 aa25.65■■□□□ 1.7
COL9A3-213ENST00000489045 FSCN2O14926 492 aa25.64■■□□□ 1.7
COL9A3-213ENST00000489045 ASAP2O43150 1006 aa25.64■■□□□ 1.7
COL9A3-213ENST00000489045 PPM1AP35813 382 aa25.64■■□□□ 1.7
COL9A3-213ENST00000489045 RAB27AP51159 221 aa25.64■■□□□ 1.7
COL9A3-213ENST00000489045 PLCB3Q01970 1234 aa25.64■■□□□ 1.7
COL9A3-213ENST00000489045 GJD3Q8N144 294 aa25.64■■□□□ 1.7
COL9A3-213ENST00000489045 CCDC43Q96MW1 224 aaKnown RBP25.64■■□□□ 1.7
COL9A3-213ENST00000489045 MBTPS2O43462 519 aa25.63■■□□□ 1.69
COL9A3-213ENST00000489045 SSTR3P32745 418 aaPredicted RBP25.63■■□□□ 1.69
COL9A3-213ENST00000489045 GNL2Q13823 731 aaKnown RBP25.63■■□□□ 1.69
COL9A3-213ENST00000489045 ZNF174Q15697 407 aa25.63■■□□□ 1.69
COL9A3-213ENST00000489045 PIGOQ8TEQ8 1089 aa25.63■■□□□ 1.69
COL9A3-213ENST00000489045 EPHX3Q9H6B9 360 aa25.63■■□□□ 1.69
COL9A3-213ENST00000489045 TLE6Q9H808 572 aa25.63■■□□□ 1.69
COL9A3-213ENST00000489045 CD207Q9UJ71 328 aa25.63■■□□□ 1.69
COL9A3-213ENST00000489045 MEIS3P2A8K0S8 358 aa25.62■■□□□ 1.69
COL9A3-213ENST00000489045 GLP2RO95838 553 aa25.62■■□□□ 1.69
COL9A3-213ENST00000489045 RARRES1P49788 294 aa25.62■■□□□ 1.69
COL9A3-213ENST00000489045 PLPP4Q5VZY2 271 aa25.62■■□□□ 1.69
COL9A3-213ENST00000489045 PDE12Q6L8Q7 609 aaKnown RBP25.62■■□□□ 1.69
COL9A3-213ENST00000489045 MSLNLQ96KJ4 702 aa25.62■■□□□ 1.69
COL9A3-213ENST00000489045 ENTPD7Q9NQZ7 604 aa25.62■■□□□ 1.69
COL9A3-213ENST00000489045 SPG21Q9NZD8 308 aa25.62■■□□□ 1.69
COL9A3-213ENST00000489045 PUF60Q9UHX1 559 aaKnown RBP25.62■■□□□ 1.69
COL9A3-213ENST00000489045 C5orf42Q9H799 3197 aa25.62■■□□□ 1.69
COL9A3-213ENST00000489045 A0A087WWV3 80 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 PER2O15055 1255 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 ZNF623O75123 536 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 DGAT1O75907 488 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 OR52Z1P0C646 297 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 ORC2Q13416 577 aaPredicted RBP25.61■■□□□ 1.69
COL9A3-213ENST00000489045 SMAD4Q13485 552 aaKnown RBP25.61■■□□□ 1.69
COL9A3-213ENST00000489045 MXD4Q14582 209 aaPredicted RBP25.61■■□□□ 1.69
COL9A3-213ENST00000489045 RABEP1Q15276 862 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 GLB1LQ6UWU2 654 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 NOSTRINQ8IVI9 506 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 SLC39A11Q8N1S5 342 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 ASAP3Q8TDY4 903 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 RSPH1Q8WYR4 309 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 TCF25Q9BQ70 676 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 C1QTNF1Q9BXJ1 281 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 CLEC1BQ9P126 229 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 PRKAG3Q9UGI9 489 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 INPP5FQ9Y2H2 1132 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 PCDHB2Q9Y5E7 798 aa25.61■■□□□ 1.69
COL9A3-213ENST00000489045 SPATA31C1P0DKV0 1188 aa25.6■■□□□ 1.69
COL9A3-213ENST00000489045 HOXA11P31270 313 aaPredicted RBP25.6■■□□□ 1.69
COL9A3-213ENST00000489045 TECP42680 631 aa25.6■■□□□ 1.69
COL9A3-213ENST00000489045 BCAR1P56945 870 aa25.6■■□□□ 1.69
COL9A3-213ENST00000489045 KRT17Q04695 432 aa25.6■■□□□ 1.69
COL9A3-213ENST00000489045 ZP2Q05996 745 aa25.6■■□□□ 1.69
COL9A3-213ENST00000489045 SMAD2Q15796 467 aaKnown RBP25.6■■□□□ 1.69
COL9A3-213ENST00000489045 DUSP6Q16828 381 aa25.6■■□□□ 1.69
COL9A3-213ENST00000489045 NOMO2Q5JPE7 1267 aa25.6■■□□□ 1.69
COL9A3-213ENST00000489045 TTC38Q5R3I4 469 aa25.6■■□□□ 1.69
COL9A3-213ENST00000489045 PGBD4Q96DM1 585 aa25.6■■□□□ 1.69
COL9A3-213ENST00000489045 BARX2Q9UMQ3 279 aaPredicted RBP25.6■■□□□ 1.69
COL9A3-213ENST00000489045 NT5C1B-RDH14C9J2C7 533 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 USO1O60763 962 aaKnown RBP25.59■■□□□ 1.69
COL9A3-213ENST00000489045 ZC3H11AO75152 810 aaKnown RBP eCLIP25.59■■□□□ 1.69
COL9A3-213ENST00000489045 MED24O75448 989 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 ERLIN2O94905 339 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 PTENP60484 403 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 CAPSQ13938 189 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 TFDP1Q14186 410 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 UBXN11Q5T124 520 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 CATSPER3Q86XQ3 398 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 CDCA3Q99618 268 aaPredicted RBP25.59■■□□□ 1.69
COL9A3-213ENST00000489045 TUFT1Q9NNX1 390 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 TBC1D13Q9NVG8 400 aa25.59■■□□□ 1.69
COL9A3-213ENST00000489045 OFD1O75665 1012 aa25.58■■□□□ 1.69
COL9A3-213ENST00000489045 XRCC6P12956 609 aaKnown RBP eCLIP25.58■■□□□ 1.69
COL9A3-213ENST00000489045 ARL2P36404 184 aa25.58■■□□□ 1.69
COL9A3-213ENST00000489045 ALDH7A1P49419 539 aaKnown RBP25.58■■□□□ 1.69
COL9A3-213ENST00000489045 RBM10P98175 930 aaKnown RBP25.58■■□□□ 1.69
COL9A3-213ENST00000489045 AGMOQ6ZNB7 445 aa25.58■■□□□ 1.69
COL9A3-213ENST00000489045 ADHFE1Q8IWW8 467 aa25.58■■□□□ 1.69
COL9A3-213ENST00000489045 VN1R2Q8NFZ6 395 aa25.58■■□□□ 1.69
COL9A3-213ENST00000489045 POLR3FQ9H1D9 316 aaPredicted RBP25.58■■□□□ 1.69
COL9A3-213ENST00000489045 FSD2A1L4K1 749 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 HIDE1A8MVS5 230 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 INO80B-WBP1J3KQ70 363 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 TSPAN1O60635 241 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 EYA4O95677 639 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 GLRA2P23416 452 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 TRAPPC10P48553 1259 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 COASYQ13057 564 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 NBR1Q14596 966 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 PCBP1Q15365 356 aaKnown RBP eCLIP25.57■■□□□ 1.68
COL9A3-213ENST00000489045 TMC7Q7Z402 723 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 MRPL10Q7Z7H8 261 aaKnown RBP25.57■■□□□ 1.68
COL9A3-213ENST00000489045 IFNLR1Q8IU57 520 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms