RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 PRMT7Q9NVM4 692 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-224ENST00000488927 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-224ENST00000488927 SEL1LQ9UBV2 794 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 NPHP3-ACAD11A0A0J9YXS1 232 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 CCDC169A6NNP5 214 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 ZBBXA8MT70 800 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 GOLGA6L22H0YM25 854 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 ACTN4O43707 911 aaKnown RBP17.62■□□□□ 0.41
HDAC7-224ENST00000488927 ERLIN2O94905 339 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 ZNF202O95125 648 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 ZSCAN20P17040 1043 aaPredicted RBP17.62■□□□□ 0.41
HDAC7-224ENST00000488927 GAP43P17677 238 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 AXLP30530 894 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 NPTX2P47972 431 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 UBE2HP62256 183 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 MBTD1Q05BQ5 628 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 FAM160A1Q05DH4 1040 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 SHHQ15465 462 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 TPRNQ4KMQ1 711 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 RASIP1Q5U651 963 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 DYMQ7RTS9 669 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 MYCT1Q8N699 235 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 CNNM3Q8NE01 707 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 C7orf25Q9BPX7 421 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 OSBPL7Q9BZF2 842 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 TRIM9Q9C026 710 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 GOLPH3LQ9H4A5 285 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 DACT1Q9NYF0 836 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 SERTAD1Q9UHV2 236 aa17.62■□□□□ 0.41
HDAC7-224ENST00000488927 DENND3A2RUS2 1198 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 SFI1A8K8P3 1242 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 AMHP03971 560 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 CACNB1Q02641 598 aaPredicted RBP17.61■□□□□ 0.41
HDAC7-224ENST00000488927 MAPK6Q16659 721 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 FAM187BQ17R55 369 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 LONRF3Q496Y0 759 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 C9orf50Q5SZB4 431 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 CCDC65Q8IXS2 484 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 PHOSPHO2Q8TCD6 241 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 DNAJC19Q96DA6 116 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 SLC9A7Q96T83 725 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 TSPYL2Q9H2G4 693 aaPredicted RBP17.61■□□□□ 0.41
HDAC7-224ENST00000488927 ZHX3Q9H4I2 956 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 TMEM134Q9H6X4 195 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 MINDY3Q9H8M7 445 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 POLD4Q9HCU8 107 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 C1orf112Q9NSG2 853 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 SLC4A7Q9Y6M7 1214 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 SIP14410 1827 aa17.61■□□□□ 0.41
HDAC7-224ENST00000488927 SCN5AQ14524 2016 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 K7ERI5 159 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 TRAK2O60296 914 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 PRPF40AO75400 957 aaKnown RBP17.6■□□□□ 0.41
HDAC7-224ENST00000488927 CSDE1O75534 798 aaKnown RBP17.6■□□□□ 0.41
HDAC7-224ENST00000488927 MAPTP10636 758 aaKnown RBP17.6■□□□□ 0.41
HDAC7-224ENST00000488927 IDEP14735 1019 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 WDR5P61964 334 aaKnown RBP17.6■□□□□ 0.41
HDAC7-224ENST00000488927 KRBA2Q6ZNG9 492 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 FAM178BQ8IXR5 827 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 FMR1NBQ8N0W7 255 aaPredicted RBP17.6■□□□□ 0.41
HDAC7-224ENST00000488927 KCNN1Q92952 543 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 CCDC51Q96ER9 411 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 PAGE5Q96GU1 130 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 FZD8Q9H461 694 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 RGS18Q9NS28 235 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 AGPAT5Q9NUQ2 364 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 ARHGAP28Q9P2N2 729 aa17.6■□□□□ 0.41
HDAC7-224ENST00000488927 HOOK1Q9UJC3 728 aaKnown RBP17.6■□□□□ 0.41
HDAC7-224ENST00000488927 COLQQ9Y215 455 aaPredicted RBP17.6■□□□□ 0.41
HDAC7-224ENST00000488927 FRMD3A2A2Y4 597 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 ENPP3O14638 875 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 FGFR4P22455 802 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 AFMP43652 599 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 NCKAP1LP55160 1127 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 ASIC1P78348 528 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 TCTN1Q2MV58 587 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 NOTUMQ6P988 496 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 ENGASEQ8NFI3 743 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 STAMQ92783 540 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 TIGD1Q96MW7 591 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 ADAM2Q99965 735 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 TRAIPQ9BWF2 469 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 CCDC113Q9H0I3 377 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 TMX1Q9H3N1 280 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 OLFML3Q9NRN5 406 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 PANK4Q9NVE7 773 aa17.59■□□□□ 0.41
HDAC7-224ENST00000488927 PIN4Q9Y237 131 aaKnown RBP17.59■□□□□ 0.41
HDAC7-224ENST00000488927 ADGRA3Q8IWK6 1321 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 CNTNAP2Q9UHC6 1331 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 PVALEFA0A1B0GWK0 134 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 ACKR2O00590 384 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 SLC16A4O15374 487 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 GTPBP6O43824 516 aaPredicted RBP17.58■□□□□ 0.4
HDAC7-224ENST00000488927 TSPAN1O60635 241 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 PRKCBP05771 671 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 SKIP12755 728 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 STRN3Q13033 797 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 PRPF4BQ13523 1007 aaKnown RBP17.58■□□□□ 0.4
HDAC7-224ENST00000488927 SNW1Q13573 536 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms