RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 CDC25BP30305 580 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 CTCFP49711 727 aaPredicted RBP11.76□□□□□ -0.53
USP11-209ENST00000488848 BEX3Q00994 111 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 LAMTOR4Q0VGL1 99 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 DRP2Q13474 957 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 TFDP1Q14186 410 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 HSP90AA2PQ14568 343 aaPredicted RBP11.76□□□□□ -0.53
USP11-209ENST00000488848 KLHL10Q6JEL2 608 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 HS2ST1Q7LGA3 356 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.76□□□□□ -0.53
USP11-209ENST00000488848 FILIP1Q7Z7B0 1213 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 FAM114A1Q8IWE2 563 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 KIAA0319LQ8IZA0 1049 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 NME8Q8N427 588 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 CSGALNACT2Q8N6G5 542 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 ARRDC4Q8NCT1 418 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 TMEM143Q96AN5 459 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 PRIMPOLQ96LW4 560 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 FBXL18Q96ME1 805 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 CTAGE1Q96RT6 745 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 FZD8Q9H461 694 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 AGPAT3Q9NRZ7 376 aa11.76□□□□□ -0.53
USP11-209ENST00000488848 SUCLA2Q9P2R7 463 aaPredicted RBP11.76□□□□□ -0.53
USP11-209ENST00000488848 TRIP12Q14669 1992 aaPredicted RBP11.76□□□□□ -0.53
USP11-209ENST00000488848 A0A1B0GTH6 734 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 C17orf102A2RUQ5 167 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 DENND3A2RUS2 1198 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 TRIM49BA6NDI0 452 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 DNM1LO00429 736 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 AP5Z1O43299 807 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 PRPF6O94906 941 aaKnown RBP11.75□□□□□ -0.53
USP11-209ENST00000488848 ASGR1P07306 291 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 MYL3P08590 195 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 GARTP22102 1010 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 RPL13P26373 211 aaKnown RBP11.75□□□□□ -0.53
USP11-209ENST00000488848 ACLYP53396 1101 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 SOX10P56693 466 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 IRX5P78411 483 aaPredicted RBP11.75□□□□□ -0.53
USP11-209ENST00000488848 POU5F1Q01860 360 aaKnown RBP11.75□□□□□ -0.53
USP11-209ENST00000488848 PPP2R3AQ06190 1150 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 RBL2Q08999 1139 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 KCNA1Q09470 495 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 KCNA10Q16322 511 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 TCP11X2Q5H9J9 407 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 SERINC5Q86VE9 423 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 BORCS6Q96GS4 357 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 ZNF333Q96JL9 665 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 MAP7D2Q96T17 732 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 ZHX3Q9H4I2 956 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 IFT122Q9HBG6 1241 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 SAMSN1Q9NSI8 373 aaKnown RBP11.75□□□□□ -0.53
USP11-209ENST00000488848 TBC1D7Q9P0N9 293 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 MAPK8IP1Q9UQF2 711 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 GRIN2DO15399 1336 aa11.75□□□□□ -0.53
USP11-209ENST00000488848 SLC16A4O15374 487 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 NR3C1P04150 777 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 PROZP22891 400 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 CNGA1P29973 690 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 GPC3P51654 580 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 CLCN3P51790 818 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 MBTD1Q05BQ5 628 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 HIC1Q14526 733 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 SLC9C1Q4G0N8 1177 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 ZC2HC1CQ53FD0 456 aaPredicted RBP11.74□□□□□ -0.53
USP11-209ENST00000488848 CXCL17Q6UXB2 119 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 FRMD5Q7Z6J6 570 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 TRAPPC12Q8WVT3 735 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 PPP1R9BQ96SB3 815 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 ADAMTS10Q9H324 1103 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 SETD4Q9NVD3 440 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 HDAC6Q9UBN7 1215 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
USP11-209ENST00000488848 KIAA0100Q14667 2235 aaKnown RBP11.74□□□□□ -0.53
USP11-209ENST00000488848 CCDC169A6NNP5 214 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 ACKR2O00590 384 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 ABLIM1O14639 778 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 CETN3O15182 167 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 PMM2O15305 246 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 CBFA2T2O43439 604 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 GPR32O75388 356 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 NR2F2P24468 414 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 ADSSP30520 456 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 PBX1P40424 430 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 PHKA2P46019 1235 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 ZNF75DP51815 510 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 STX17P56962 302 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 FANCCQ00597 558 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 AMHR2Q16671 573 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 NBPF20Q3BBV1 942 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 C1orf53Q5VUE5 145 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 SLC39A4Q6P5W5 647 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 MAEAQ7L5Y9 396 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 TRIM59Q8IWR1 403 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 ZBTB8OSQ8IWT0 167 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 TNS4Q8IZW8 715 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms