RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CWH43Q9H720 699 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 FAM105AQ9NUU6 356 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 TYW1Q9NV66 732 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 PLAGL2Q9UPG8 496 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 CLIC4Q9Y696 253 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 GRM6O15303 877 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 HOXA2O43364 376 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 TSPAN1O60635 241 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 EYA4O95677 639 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 BMP15O95972 392 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 GRIN1Q05586 938 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 CAMK1Q14012 370 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 PTPAQ15257 358 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 TWF2Q6IBS0 349 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 P2RX5Q93086 422 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 C11orf84Q9BUA3 381 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 POLD4Q9HCU8 107 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 DNM3Q9UQ16 869 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 UNC80Q8N2C7 3258 aa17.69■□□□□ 0.42
CTDSP1-209ENST00000488627 MEIS3P2A8K0S8 358 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 INO80B-WBP1J3KQ70 363 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 STX6O43752 255 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 ITGB1P05556 798 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 NAALADL2Q58DX5 795 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 CDCA2Q69YH5 1023 aaPredicted RBP17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 MRPL10Q7Z7H8 261 aaKnown RBP17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 HSCBQ8IWL3 235 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 KLHL23Q8NBE8 558 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 RNF169Q8NCN4 708 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 SPPL3Q8TCT6 385 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 PCDHB2Q9Y5E7 798 aa17.68■□□□□ 0.42
CTDSP1-209ENST00000488627 SKIP12755 728 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 DNAJB1P25685 340 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 AXLP30530 894 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 RAB27AP51159 221 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 TMEM119Q4V9L6 283 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 C1orf186Q6ZWK4 172 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 DAW1Q8N136 415 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 KCTD17Q8N5Z5 321 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 HELQQ8TDG4 1101 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 LPPQ93052 612 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 AK8Q96MA6 479 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 RUSC1Q9BVN2 902 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 FZD8Q9H461 694 aa17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 ALG13Q9NP73 1137 aaKnown RBP17.67■□□□□ 0.42
CTDSP1-209ENST00000488627 LRRIQ4A6NIV6 560 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 B4GALT5O43286 388 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 OFD1O75665 1012 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 ERLIN2O94905 339 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 ARF4P18085 180 aaPredicted RBP17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 PTPROQ16827 1216 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 LONRF3Q496Y0 759 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 RINT1Q6NUQ1 792 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 AGMOQ6ZNB7 445 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 SMG8Q8ND04 991 aaKnown RBP17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 LRRC15Q8TF66 581 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 CPB2Q96IY4 423 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 PLIN2Q99541 437 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 LMAN2LQ9H0V9 348 aa17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 ZSCAN16Q9H4T2 348 aaPredicted RBP17.66■□□□□ 0.42
CTDSP1-209ENST00000488627 A0A1B0GUA9 196 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 TTLL13PA6NNM8 815 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 SLC26A4O43511 780 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 LONP1P36776 959 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 NAMPTP43490 491 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 MAPK7Q13164 816 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 ZRSR1Q15695 479 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 FAM187BQ17R55 369 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 CABP7Q86V35 215 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 ABI1Q8IZP0 508 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 LRRC43Q8N309 656 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 SYT2Q8N9I0 419 aaPredicted RBP17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 COLGALT1Q8NBJ5 622 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 KIFAP3Q92845 792 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 CCDC51Q96ER9 411 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 USP28Q96RU2 1077 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 EIF2AQ9BY44 585 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 CCDC113Q9H0I3 377 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 NT5C3AQ9H0P0 336 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 CSRNP2Q9H175 543 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 FBXO2Q9UK22 296 aaPredicted RBP17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 REV3LO60673 3130 aa17.65■□□□□ 0.42
CTDSP1-209ENST00000488627 LAG3P18627 525 aa17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 NCLP19338 710 aaKnown RBP17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 SLC12A3P55017 1021 aa17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 NOTUMQ6P988 496 aa17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 ATXN2LQ8WWM7 1075 aaKnown RBP17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 KIFC3Q9BVG8 833 aa17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 AAASQ9NRG9 546 aa17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 THEGQ9P2T0 379 aa17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 PCDHB12Q9Y5F1 795 aa17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 MORC2Q9Y6X9 1032 aaPredicted RBP17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 SPTBN5Q9NRC6 3674 aaKnown RBP17.64■□□□□ 0.41
CTDSP1-209ENST00000488627 ARID2Q68CP9 1835 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 HIP1RO75146 1068 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 FGF18O76093 207 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 GUCY2CP25092 1073 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms