RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 BRD1O95696 1058 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 AXLP30530 894 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 NAMPTP43490 491 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 BTG3Q14201 252 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-207ENST00000488591 KARSQ15046 597 aaKnown RBP16.66■□□□□ 0.26
CXCL12-207ENST00000488591 SPECC1Q5M775 1068 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 C1orf186Q6ZWK4 172 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 CRIPAKQ8N1N5 446 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 ZNF689Q96CS4 500 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-207ENST00000488591 EPSTI1Q96J88 318 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 GUCD1Q96NT3 240 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 SAMD11Q96NU1 681 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 GAS2L1Q99501 681 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-207ENST00000488591 PRDM12Q9H4Q4 367 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 AGPAT5Q9NUQ2 364 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 KCNG1Q9UIX4 513 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 ADGRA3Q8IWK6 1321 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 A0A0U1RQF3 1178 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 EOMESO95936 686 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 PLCG1P19174 1290 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 GUCY2CP25092 1073 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 RAB27AP51159 221 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 ERVK-21P61565 698 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 MBTD1Q05BQ5 628 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 ECHDC2Q86YB7 292 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 CMTR2Q8IYT2 770 aaKnown RBP16.65■□□□□ 0.26
CXCL12-207ENST00000488591 RNF169Q8NCN4 708 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 KCNG4Q8TDN1 519 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 ARNTL2Q8WYA1 636 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 SYMPKQ92797 1274 aaKnown RBP16.65■□□□□ 0.26
CXCL12-207ENST00000488591 RUSC1Q9BVN2 902 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 CERS4Q9HA82 394 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 C17orf75Q9HAS0 396 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 POLD4Q9HCU8 107 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 PRMT7Q9NVM4 692 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-207ENST00000488591 RWDD3Q9Y3V2 267 aa16.65■□□□□ 0.26
CXCL12-207ENST00000488591 CUTAO60888 179 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 HIP1RO75146 1068 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 ARHGEF15O94989 841 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 FOSL2P15408 326 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 DDIT3P35638 169 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 EFNA5P52803 228 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 SLC12A3P55017 1021 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 DNM1Q05193 864 aaKnown RBP16.64■□□□□ 0.25
CXCL12-207ENST00000488591 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
CXCL12-207ENST00000488591 MAPK6Q16659 721 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 RRAGBQ5VZM2 374 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 CDCA2Q69YH5 1023 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-207ENST00000488591 NOTUMQ6P988 496 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 ABI1Q8IZP0 508 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 MYLIPQ8WY64 445 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 BSNDQ8WZ55 320 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 RAD54LQ92698 747 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 CCDC51Q96ER9 411 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 PRIMPOLQ96LW4 560 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 FAM105AQ9NUU6 356 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 STK17AQ9UEE5 414 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 STXBP5LQ9Y2K9 1186 aa16.64■□□□□ 0.25
CXCL12-207ENST00000488591 COL4A6Q14031 1691 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 CCDC169A6NNP5 214 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 TBKBP1A7MCY6 615 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 TSPAN1O60635 241 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 SLC34A2O95436 690 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 KRT18P05783 430 aaKnown RBP16.63■□□□□ 0.25
CXCL12-207ENST00000488591 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
CXCL12-207ENST00000488591 HOXA11P31270 313 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-207ENST00000488591 ME1P48163 572 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 PEX3P56589 373 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 DMP1Q13316 513 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-207ENST00000488591 TMEM132AQ24JP5 1023 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 PAN2Q504Q3 1202 aaKnown RBP16.63■□□□□ 0.25
CXCL12-207ENST00000488591 CCDC73Q6ZRK6 1079 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 GPBP1Q86WP2 473 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 LARP4BQ92615 738 aaKnown RBP16.63■□□□□ 0.25
CXCL12-207ENST00000488591 PGBD4Q96DM1 585 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 RC3H2Q9HBD1 1191 aaKnown RBP16.63■□□□□ 0.25
CXCL12-207ENST00000488591 MTUS1Q9ULD2 1270 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 ZDHHC9Q9Y397 364 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 SZT2Q5T011 3432 aa16.63■□□□□ 0.25
CXCL12-207ENST00000488591 ZNF623O75123 536 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 FGFR1P11362 822 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 LIG1P18858 919 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 SMTNP53814 917 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 KRT85P78386 507 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 NUCB2P80303 420 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 RAD51AP2Q09MP3 1159 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 MCM6Q14566 821 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 FAM187BQ17R55 369 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 SPOUT1Q5T280 376 aaKnown RBP16.62■□□□□ 0.25
CXCL12-207ENST00000488591 TMEM192Q8IY95 271 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 CNNM3Q8NE01 707 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 FBXO22Q8NEZ5 403 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 C17orf80Q9BSJ5 609 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 TMEM117Q9H0C3 514 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 KMT5AQ9NQR1 393 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 BLOC1S4Q9NUP1 217 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 RBM19Q9Y4C8 960 aaKnown RBP16.62■□□□□ 0.25
CXCL12-207ENST00000488591 PCDHB2Q9Y5E7 798 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms