RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SEMA4AQ9H3S1 761 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 SLC5A4Q9NY91 659 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 CTDP1Q9Y5B0 961 aaPredicted RBP5.9□□□□□ -1.46
ITGB1-214ENST00000488427 COL4A3BPQ9Y5P4 624 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 GOLGA8AA7E2F4 631 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 MTSS1O43312 755 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 PRICKLE3O43900 615 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-214ENST00000488427 PPARAQ07869 468 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 ADAM15Q13444 863 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 TCIRG1Q13488 830 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 ZXDCQ2QGD7 858 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-214ENST00000488427 PLA2G15Q8NCC3 412 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 SSH1Q8WYL5 1049 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 RABGGTAQ92696 567 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 LOXL4Q96JB6 756 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 CDK5RAP1Q96SZ6 601 aaKnown RBP5.89□□□□□ -1.47
ITGB1-214ENST00000488427 ANO3Q9BYT9 981 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 TMPRSS5Q9H3S3 457 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 DNAI1Q9UI46 699 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 USP18Q9UMW8 372 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 TCAF1Q9Y4C2 921 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 PPP2R3BQ9Y5P8 575 aa5.89□□□□□ -1.47
ITGB1-214ENST00000488427 ZNF608Q9ULD9 1512 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-214ENST00000488427 EIF4G3O43432 1585 aaKnown RBP5.89□□□□□ -1.47
ITGB1-214ENST00000488427 PRSS38A1L453 326 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 ELL2O00472 640 aaPredicted RBP5.88□□□□□ -1.47
ITGB1-214ENST00000488427 CFBP00751 764 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 ID4P47928 161 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 SLC5A3P53794 718 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 ANAPC15P60006 121 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 MRPS9P82933 396 aaKnown RBP5.88□□□□□ -1.47
ITGB1-214ENST00000488427 PTPROQ16827 1216 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.88□□□□□ -1.47
ITGB1-214ENST00000488427 RNF151Q2KHN1 245 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 CLEC14AQ86T13 490 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 DDX42Q86XP3 938 aaKnown RBP eCLIP5.88□□□□□ -1.47
ITGB1-214ENST00000488427 FAM177A1Q8N128 213 aaPredicted RBP5.88□□□□□ -1.47
ITGB1-214ENST00000488427 SHCBP1Q8NEM2 672 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 OR14K1Q8NGZ2 314 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 NKD2Q969F2 451 aaPredicted RBP5.88□□□□□ -1.47
ITGB1-214ENST00000488427 FAM89AQ96GI7 184 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 TOPORSQ9NS56 1045 aaPredicted RBP5.88□□□□□ -1.47
ITGB1-214ENST00000488427 PPP4R1LQ9P1A2 415 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 RCAN3Q9UKA8 241 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 PTPN22Q9Y2R2 807 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 RBM8AQ9Y5S9 174 aaKnown RBP5.88□□□□□ -1.47
ITGB1-214ENST00000488427 TSPOAP1O95153 1857 aa5.88□□□□□ -1.47
ITGB1-214ENST00000488427 A0A1W2PRX2 142 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 K7ESF4 209 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 VSIG10L2P0DP72 767 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 CDK11BP21127 795 aaKnown RBP5.87□□□□□ -1.47
ITGB1-214ENST00000488427 WNT3AP56704 352 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 BPIFB4P59827 614 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 EFEMP1Q12805 493 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 ZBTB41Q5SVQ8 909 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 UNQ6494/PRO21346Q6UXR6 183 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 POLNQ7Z5Q5 900 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 ADGRE4PQ86SQ3 457 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 TAX1BP1Q86VP1 789 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 BCL6BQ8N143 479 aaPredicted RBP5.87□□□□□ -1.47
ITGB1-214ENST00000488427 AUTS2Q8WXX7 1259 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 MPHOSPH9Q99550 1183 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 SMPD4Q9NXE4 827 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 PRSS50Q9UI38 385 aa5.87□□□□□ -1.47
ITGB1-214ENST00000488427 NOP58Q9Y2X3 529 aaKnown RBP5.87□□□□□ -1.47
ITGB1-214ENST00000488427 CLASP1Q7Z460 1538 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 PHLDB1Q86UU1 1377 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 hCG_2014768A0A024R1R8 64 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 CYP27B1O15528 508 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 RAD17O75943 681 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 HGFACQ04756 655 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 ANO4Q32M45 955 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 MFSD5Q6N075 450 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 MEGF9Q9H1U4 602 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 KCTD10Q9H3F6 313 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 DEF6Q9H4E7 631 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 PCDH12Q9NPG4 1184 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 C14orf119Q9NWQ9 140 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 MRFAP1Q9Y605 127 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 CDY2AQ9Y6F7 541 aa5.86□□□□□ -1.47
ITGB1-214ENST00000488427 ZCCHC6Q5VYS8 1495 aaKnown RBP5.85□□□□□ -1.47
ITGB1-214ENST00000488427 FANCD2Q9BXW9 1451 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 PHF2O75151 1096 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 PRKD3O94806 890 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 TOX4O94842 621 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 SEC24DO94855 1032 aaPredicted RBP5.85□□□□□ -1.47
ITGB1-214ENST00000488427 KIR2DL3P43628 341 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 SELENOPP49908 381 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 ADCY7P51828 1080 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 GUCY2FP51841 1108 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 NPEPPSP55786 919 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 LGALS4P56470 323 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 ANTXR2P58335 489 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 KLF1Q13351 362 aaPredicted RBP5.85□□□□□ -1.47
ITGB1-214ENST00000488427 ZNF662Q6ZS27 426 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 ANKRD53Q8N9V6 530 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 PPP1R14CQ8TAE6 165 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 LMBR1Q8WVP7 490 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 FATE1Q969F0 183 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms