RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 FAM13AO94988 1023 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 ADCY5O95622 1261 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 SUPT20HL2P0C7V6 817 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 PRCPP42785 496 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 ID4P47928 161 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 KCNJ6P48051 423 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 TNFAIP2Q03169 654 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 GIT2Q14161 759 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 FAM160B1Q5W0V3 765 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 RINT1Q6NUQ1 792 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 METTL7BQ6UX53 244 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 ABHD15Q6UXT9 468 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 CYFIP1Q7L576 1253 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 TLK2Q86UE8 772 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 RNF135Q8IUD6 432 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 SMYD4Q8IYR2 804 aaPredicted RBP13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 NELFBQ8WX92 580 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 ZBED2Q9BTP6 218 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 TRIM5Q9C035 493 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 MLXIPQ9HAP2 919 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 GABBR1Q9UBS5 961 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 DDX41Q9UJV9 622 aaKnown RBP13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 ODF2LQ9ULJ1 636 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 NFE2L3Q9Y4A8 694 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 PLXNA3P51805 1871 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 KMT2EQ8IZD2 1858 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 BACH1O14867 736 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 CBFA2T2O43439 604 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 ZEB2O60315 1214 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 BAIAP3O94812 1187 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 ATG7O95352 703 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 GGPS1O95749 300 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 PTGS1P23219 599 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 CCNE1P24864 410 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 YWHABP31946 246 aaKnown RBP13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 SP4Q02446 784 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 EHHADHQ08426 723 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 ARSHQ5FYA8 562 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 TRIM67Q6ZTA4 783 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 C1orf186Q6ZWK4 172 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 EEPD1Q7L9B9 569 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 ASCL5Q7RTU5 278 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 FBXO16Q8IX29 292 aaPredicted RBP13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 GUF1Q8N442 669 aaKnown RBP13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 FBXL6Q8N531 539 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 NOC3LQ8WTT2 800 aaKnown RBP13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 SEPT1Q8WYJ6 367 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 PDLIM2Q96JY6 352 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 RUSC1Q9BVN2 902 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 IRF2BPLQ9H1B7 796 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 ZHX3Q9H4I2 956 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 WRAP73Q9P2S5 460 aaPredicted RBP13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 SEL1LQ9UBV2 794 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 GNEQ9Y223 722 aaKnown RBP13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 MYO15AQ9UKN7 3530 aa13.3□□□□□ -0.28
HLA-DOB-209ENST00000488325 LINC01553A4QN01 128 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 NOP56O00567 594 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 IQCF3P0C7M6 154 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 CDK11BP21127 795 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 GUCY2CP25092 1073 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 RARRES1P49788 294 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 ZNF75DP51815 510 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 STX17P56962 302 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 WDR5P61964 334 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 SP2Q02086 613 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 SPAG1Q07617 926 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 STK4Q13043 487 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 XKR9Q5GH70 373 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 CELF3Q5SZQ8 465 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 SWSAP1Q6NVH7 229 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 PADI6Q6TGC4 694 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 STXBP4Q6ZWJ1 553 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 MYOCDQ8IZQ8 938 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 KIAA0895Q8NCT3 520 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 ANKRD20A12PQ8NF67 263 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 TET1Q8NFU7 2136 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 PABPC5Q96DU9 382 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 POP1Q99575 1024 aaKnown RBP13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 TSG101Q99816 390 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 REEP2Q9BRK0 252 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 AP5M1Q9H0R1 490 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 SLC39A2Q9NP94 309 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 ZNF302Q9NR11 478 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 IGSF9BQ9UPX0 1349 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 SIP14410 1827 aa13.29□□□□□ -0.28
HLA-DOB-209ENST00000488325 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 RBM47A0AV96 593 aaKnown RBP13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 PROB1E7EW31 1015 aa13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 DYNC1LI2O43237 492 aaPredicted RBP13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 FGFR1OPO95684 399 aaKnown RBP13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 TPM3P06753 285 aa13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 TXNP10599 105 aaKnown RBP13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 CDC25BP30305 580 aa13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 DEFB103AP81534 67 aa13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 RAD51AP2Q09MP3 1159 aa13.28□□□□□ -0.28
HLA-DOB-209ENST00000488325 UGCGQ16739 394 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms