RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 GET4Q7L5D6 327 aaPredicted RBP10.5□□□□□ -0.73
COL17A1-207ENST00000488320 HEATR3Q7Z4Q2 680 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 ZNF654Q8IZM8 581 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 LRRC71Q8N4P6 559 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 SRBD1Q8N5C6 995 aaKnown RBP10.5□□□□□ -0.73
COL17A1-207ENST00000488320 RSPH1Q8WYR4 309 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 PHKBQ93100 1093 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 PGBD1Q96JS3 809 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 SLC2A4RGQ9NR83 387 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 TBC1D13Q9NVG8 400 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 ZSCAN32Q9NX65 697 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 DNAJB4Q9UDY4 337 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 RAB23Q9ULC3 237 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 SSX2IPQ9Y2D8 614 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 FAN1Q9Y2M0 1017 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 NUMBLQ9Y6R0 609 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 MAP1BP46821 2468 aaKnown RBP10.5□□□□□ -0.73
COL17A1-207ENST00000488320 MEIS1O00470 390 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 CSDE1O75534 798 aaKnown RBP10.49□□□□□ -0.73
COL17A1-207ENST00000488320 RFPL2O75678 378 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 PLEKHA8P1O95397 391 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 GLUD1P00367 558 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 URODP06132 367 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 ADH1AP07327 375 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 SPATA31D3P0C874 917 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 GPC3P51654 580 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 GPC5P78333 572 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 B4GALNT3Q6L9W6 998 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 SPATA31D4Q6ZUB0 917 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 PLA2G4DQ86XP0 818 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 URGCPQ8TCY9 931 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 GCOM2Q9BZD3 368 aaPredicted RBP10.49□□□□□ -0.73
COL17A1-207ENST00000488320 CHST12Q9NRB3 414 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 NRBP2Q9NSY0 501 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 GABBR1Q9UBS5 961 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 SAMM50Q9Y512 469 aa10.49□□□□□ -0.73
COL17A1-207ENST00000488320 CCDC69A6NI79 296 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 E7EWF7 191 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 GAS2O43903 313 aaKnown RBP10.48□□□□□ -0.73
COL17A1-207ENST00000488320 LILRB3O75022 631 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 OFD1O75665 1012 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 DDAH1O94760 285 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 FOSP01100 380 aaPredicted RBP10.48□□□□□ -0.73
COL17A1-207ENST00000488320 PSAPP07602 524 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 SPEM2Q0P670 501 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 MLF2Q15773 248 aaPredicted RBP10.48□□□□□ -0.73
COL17A1-207ENST00000488320 SLC44A4Q53GD3 710 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 TSSK4Q6SA08 328 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 CASC1Q6TDU7 716 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 PALB2Q86YC2 1186 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 ZNF280BQ86YH2 543 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 IGDCC4Q8TDY8 1250 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 PGBD4Q96DM1 585 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 VN1R3Q9BXE9 311 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 NT5C3AQ9H0P0 336 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 EPC1Q9H2F5 836 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 SH2B1Q9NRF2 756 aaPredicted RBP10.48□□□□□ -0.73
COL17A1-207ENST00000488320 MTF2Q9Y483 593 aaPredicted RBP10.48□□□□□ -0.73
COL17A1-207ENST00000488320 MAFBQ9Y5Q3 323 aaPredicted RBP10.48□□□□□ -0.73
COL17A1-207ENST00000488320 CFAP47Q6ZTR5 3102 aa10.48□□□□□ -0.73
COL17A1-207ENST00000488320 DOCK8Q8NF50 2099 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.47□□□□□ -0.73
COL17A1-207ENST00000488320 ANHXE9PGG2 379 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 NRP1O14786 923 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 NCAM2O15394 837 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 TEX28O15482 410 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 SOD2P04179 222 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 CYP21A2P08686 494 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 RXRAP19793 462 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 CD72P21854 359 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 TGM1P22735 817 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 MAGEA9P43362 315 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 NAPAP54920 295 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 PRKCQQ04759 706 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 HTR4Q13639 388 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 LPAL2Q16609 132 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 ZBTB41Q5SVQ8 909 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 ZBTB44Q8NCP5 570 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 NETO1Q8TDF5 533 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 FAM167AQ96KS9 214 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 RPS6KC1Q96S38 1066 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 ZNF577Q9BSK1 485 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 RPP25Q9BUL9 199 aaKnown RBP10.47□□□□□ -0.73
COL17A1-207ENST00000488320 ANO3Q9BYT9 981 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 RHOBTB2Q9BYZ6 727 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 OSBPL6Q9BZF3 934 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 INO80BQ9C086 356 aaPredicted RBP10.47□□□□□ -0.73
COL17A1-207ENST00000488320 LY9Q9HBG7 655 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 PARD6AQ9NPB6 346 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 TBC1D22BQ9NU19 505 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 FAM105AQ9NUU6 356 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 ANGPTL2Q9UKU9 493 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 PIN4Q9Y237 131 aaKnown RBP10.47□□□□□ -0.73
COL17A1-207ENST00000488320 PCDHA10Q9Y5I2 948 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.47□□□□□ -0.73
COL17A1-207ENST00000488320 BAHCC1Q9P281 2608 aa10.47□□□□□ -0.73
COL17A1-207ENST00000488320 MTCL1Q9Y4B5 1905 aaKnown RBP10.46□□□□□ -0.73
COL17A1-207ENST00000488320 MEIS3P2A8K0S8 358 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 IPO5O00410 1097 aaKnown RBP10.46□□□□□ -0.73
COL17A1-207ENST00000488320 SLC30A4O14863 429 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms