RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 DMP1Q13316 513 aaPredicted RBP12.21□□□□□ -0.45
UBE4B-210ENST00000488228 GIT2Q14161 759 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 IKBKEQ14164 716 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 PPP2R5AQ15172 486 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBE4B-210ENST00000488228 SRGAP1Q7Z6B7 1085 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 TMEM87AQ8NBN3 555 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 DEPTORQ8TB45 409 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 DDX12PQ92771 950 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 IFT74Q96LB3 600 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 TIPINQ9BVW5 301 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 INO80BQ9C086 356 aaPredicted RBP12.21□□□□□ -0.45
UBE4B-210ENST00000488228 TNMDQ9H2S6 317 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 CUEDC2Q9H467 287 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 ODF2LQ9ULJ1 636 aa12.21□□□□□ -0.45
UBE4B-210ENST00000488228 PIN4Q9Y237 131 aaKnown RBP12.21□□□□□ -0.45
UBE4B-210ENST00000488228 CITO14578 2027 aa12.21□□□□□ -0.46
UBE4B-210ENST00000488228 PHLPP2Q6ZVD8 1323 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 ABHD14A-ACY1A0A1B0GW23 586 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 GPR182O15218 404 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 SLC16A4O15374 487 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 B4GALT5O43286 388 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 TSPAN1O60635 241 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 ERLIN2O94905 339 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 PLS3P13797 630 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 AFMP43652 599 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 KCNJ6P48051 423 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 ZNF131P52739 623 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 SFR1Q86XK3 245 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 IFNLR1Q8IU57 520 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-210ENST00000488228 ZBTB8OSQ8IWT0 167 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 CEP57L1Q8IYX8 460 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 MYOCDQ8IZQ8 938 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 DNAJC19Q96DA6 116 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 NFKBIZQ9BYH8 718 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 CCDC113Q9H0I3 377 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 BLZF1Q9H2G9 400 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 MTIF3Q9H2K0 278 aaKnown RBP12.2□□□□□ -0.46
UBE4B-210ENST00000488228 MAGEF1Q9HAY2 307 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 KMT5AQ9NQR1 393 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 AGPAT5Q9NUQ2 364 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 SLC4A7Q9Y6M7 1214 aa12.2□□□□□ -0.46
UBE4B-210ENST00000488228 ANK1P16157 1881 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 DENND3A2RUS2 1198 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 TTLL13PA6NNM8 815 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 GRXCR1A8MXD5 290 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 K7ENM7 598 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 PRKCBP05771 671 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 SLFN14P0C7P3 912 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 IDEP14735 1019 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 ASIC1P78348 528 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 DSC3Q14574 896 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 AMHR2Q16671 573 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 LONRF3Q496Y0 759 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 ODR4Q5SWX8 454 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 FAM117BQ6P1L5 589 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 RTN4RL1Q86UN2 441 aaPredicted RBP12.19□□□□□ -0.46
UBE4B-210ENST00000488228 MYCT1Q8N699 235 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 CPB2Q96IY4 423 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 ADAM2Q99965 735 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 PYM1Q9BRP8 204 aaKnown RBP12.19□□□□□ -0.46
UBE4B-210ENST00000488228 FTHL17Q9BXU8 183 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 C2orf40Q9H1Z8 148 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
UBE4B-210ENST00000488228 PARVGQ9HBI0 331 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 ARHGAP28Q9P2N2 729 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 CHD9Q3L8U1 2897 aa12.19□□□□□ -0.46
UBE4B-210ENST00000488228 CNTNAP2Q9UHC6 1331 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 ATG2AQ2TAZ0 1938 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 A0A1W2PPC1 479 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 EFCAB14O75071 495 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 AMHP03971 560 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 ATP2A2P16615 1042 aaKnown RBP12.18□□□□□ -0.46
UBE4B-210ENST00000488228 FAM160A1Q05DH4 1040 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 POU5F1BQ06416 359 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 COASYQ13057 564 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 CUL4BQ13620 913 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 TWF2Q6IBS0 349 aaKnown RBP12.18□□□□□ -0.46
UBE4B-210ENST00000488228 KRBA2Q6ZNG9 492 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 TAS1R3Q7RTX0 852 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 CDR2LQ86X02 465 aaPredicted RBP12.18□□□□□ -0.46
UBE4B-210ENST00000488228 FMR1NBQ8N0W7 255 aaPredicted RBP12.18□□□□□ -0.46
UBE4B-210ENST00000488228 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 PAGE5Q96GU1 130 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 SLC9A7Q96T83 725 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 FGFBP2Q9BYJ0 223 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 C17orf75Q9HAS0 396 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 TBC1D7Q9P0N9 293 aa12.18□□□□□ -0.46
UBE4B-210ENST00000488228 FRMD3A2A2Y4 597 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 SOX1O00570 391 aaPredicted RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 ENPP3O14638 875 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 PRPF40AO75400 957 aaKnown RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 UPP2O95045 317 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 ZNF202O95125 648 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms