RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 TTC12Q9H892 705 aaPredicted RBP21.59■■□□□ 1.05
CD55-209ENST00000488171 MINDY3Q9H8M7 445 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 C11orf16Q9NQ32 467 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 AGPAT5Q9NUQ2 364 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 FAM105AQ9NUU6 356 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 MEIS3P2A8K0S8 358 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 GAS2O43903 313 aaKnown RBP21.58■■□□□ 1.04
CD55-209ENST00000488171 LYPLA2O95372 231 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 EYA4O95677 639 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 SRGAP2CP0DJJ0 459 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 TXKP42681 527 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 RBM10P98175 930 aaKnown RBP21.58■■□□□ 1.04
CD55-209ENST00000488171 GUCY1B3Q02153 619 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 DUSP6Q16828 381 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 C8orf34Q49A92 452 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 VN1R2Q8NFZ6 395 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 MRPL9Q9BYD2 267 aaKnown RBP21.58■■□□□ 1.04
CD55-209ENST00000488171 XPNPEP1Q9NQW7 623 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 SPG21Q9NZD8 308 aa21.58■■□□□ 1.04
CD55-209ENST00000488171 BARX2Q9UMQ3 279 aaPredicted RBP21.58■■□□□ 1.04
CD55-209ENST00000488171 C5orf42Q9H799 3197 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 ZNF623O75123 536 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 SKIP12755 728 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 PPM1AP35813 382 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 COASYQ13057 564 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 LONRF3Q496Y0 759 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 PLPP4Q5VZY2 271 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 SRGAP1Q7Z6B7 1085 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 FERMT3Q86UX7 667 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 SLC39A11Q8N1S5 342 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 SMRP1Q8NCR6 262 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 TCP11Q8WWU5 503 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 MTRQ99707 1265 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 TCF25Q9BQ70 676 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 LRFN3Q9BTN0 628 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 TMEM60Q9H2L4 133 aa21.57■■□□□ 1.04
CD55-209ENST00000488171 PUF60Q9UHX1 559 aaKnown RBP21.57■■□□□ 1.04
CD55-209ENST00000488171 RAB27AP51159 221 aa21.56■■□□□ 1.04
CD55-209ENST00000488171 TMEM31Q5JXX7 168 aa21.56■■□□□ 1.04
CD55-209ENST00000488171 RNF149Q8NC42 400 aa21.56■■□□□ 1.04
CD55-209ENST00000488171 CDCA3Q99618 268 aaPredicted RBP21.56■■□□□ 1.04
CD55-209ENST00000488171 LLPHQ9BRT6 129 aaKnown RBP21.56■■□□□ 1.04
CD55-209ENST00000488171 HIDE1A8MVS5 230 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 ASAP2O43150 1006 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 GPR37L1O60883 481 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 HOXA11P31270 313 aaPredicted RBP21.55■■□□□ 1.04
CD55-209ENST00000488171 BCAR1P56945 870 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 KRT17Q04695 432 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 KCNC3Q14003 757 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 RSPH1Q8WYR4 309 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 C8orf76Q96K31 380 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 ENTPD7Q9NQZ7 604 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 ANKEF1Q9NU02 776 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 PCDHB2Q9Y5E7 798 aa21.55■■□□□ 1.04
CD55-209ENST00000488171 FAM86C2PA6NEL3 165 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 POTEMA6NI47 508 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 NT5C1B-RDH14C9J2C7 533 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 OFD1O75665 1012 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 ATP2B1P20020 1258 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 MCM7P33993 719 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 SAFBQ15424 915 aaKnown RBP eCLIP21.54■■□□□ 1.04
CD55-209ENST00000488171 NOMO2Q5JPE7 1267 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 UBXN11Q5T124 520 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 GLB1LQ6UWU2 654 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 NGRNQ9NPE2 291 aaKnown RBP21.54■■□□□ 1.04
CD55-209ENST00000488171 TBC1D13Q9NVG8 400 aa21.54■■□□□ 1.04
CD55-209ENST00000488171 FSD2A1L4K1 749 aa21.53■■□□□ 1.04
CD55-209ENST00000488171 ALDH7A1P49419 539 aaKnown RBP21.53■■□□□ 1.04
CD55-209ENST00000488171 RARRES1P49788 294 aa21.53■■□□□ 1.04
CD55-209ENST00000488171 AGMOQ6ZNB7 445 aa21.53■■□□□ 1.04
CD55-209ENST00000488171 ZSCAN31Q96LW9 406 aaPredicted RBP21.53■■□□□ 1.04
CD55-209ENST00000488171 POP1Q99575 1024 aaKnown RBP21.53■■□□□ 1.04
CD55-209ENST00000488171 INPP5FQ9Y2H2 1132 aa21.53■■□□□ 1.04
CD55-209ENST00000488171 A0A087WWV3 80 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 ZC3H11AO75152 810 aaKnown RBP eCLIP21.52■■□□□ 1.04
CD55-209ENST00000488171 DGAT1O75907 488 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 SPATA31C1P0DKV0 1188 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 PTENP60484 403 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 MXD4Q14582 209 aaPredicted RBP21.52■■□□□ 1.04
CD55-209ENST00000488171 TMEM184AQ6ZMB5 413 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 TMC7Q7Z402 723 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 MRPL10Q7Z7H8 261 aaKnown RBP21.52■■□□□ 1.04
CD55-209ENST00000488171 TMEM173Q86WV6 379 aaPredicted RBP21.52■■□□□ 1.04
CD55-209ENST00000488171 ASAP3Q8TDY4 903 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 PIGOQ8TEQ8 1089 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 PGBD4Q96DM1 585 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 FOXP1Q9H334 677 aaPredicted RBP21.52■■□□□ 1.04
CD55-209ENST00000488171 NRDE2Q9H7Z3 1164 aa21.52■■□□□ 1.04
CD55-209ENST00000488171 USP15Q9Y4E8 981 aaPredicted RBP21.52■■□□□ 1.04
CD55-209ENST00000488171 B4GALT3O60512 393 aa21.51■■□□□ 1.03
CD55-209ENST00000488171 ALADP13716 330 aa21.51■■□□□ 1.03
CD55-209ENST00000488171 ARL2P36404 184 aa21.51■■□□□ 1.03
CD55-209ENST00000488171 HMGN5P82970 282 aaKnown RBP21.51■■□□□ 1.03
CD55-209ENST00000488171 CAPSQ13938 189 aa21.51■■□□□ 1.03
CD55-209ENST00000488171 IFNLR1Q8IU57 520 aaPredicted RBP21.51■■□□□ 1.03
CD55-209ENST00000488171 MRPL43Q8N983 215 aaKnown RBP21.51■■□□□ 1.03
CD55-209ENST00000488171 FBXO18Q8NFZ0 1043 aa21.51■■□□□ 1.03
CD55-209ENST00000488171 SH2B1Q9NRF2 756 aaPredicted RBP21.51■■□□□ 1.03
CD55-209ENST00000488171 C2orf71A6NGG8 1288 aa21.5■■□□□ 1.03
CD55-209ENST00000488171 DCXO43602 365 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms