RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 OTUD6AQ7L8S5 288 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 EFHBQ8N7U6 833 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 PSPC1Q8WXF1 523 aaKnown RBP12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 MRPS27Q92552 414 aaKnown RBP12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 C8orf76Q96K31 380 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 MTRQ99707 1265 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 LRFN3Q9BTN0 628 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 CHST12Q9NRB3 414 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 FAM105AQ9NUU6 356 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 CLEC1BQ9P126 229 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 PUF60Q9UHX1 559 aaKnown RBP12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 MTCL1Q9Y4B5 1905 aaKnown RBP12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 POTEMA6NI47 508 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 HIDE1A8MVS5 230 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 ZC3H11AO75152 810 aaKnown RBP eCLIP12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 RFC5P40937 340 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 BCAR1P56945 870 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 SAFBQ15424 915 aaKnown RBP eCLIP12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 ZNF174Q15697 407 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 SMAD2Q15796 467 aaKnown RBP12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 MAEAQ7L5Y9 396 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 TMC7Q7Z402 723 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 FERMT3Q86UX7 667 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 RNF149Q8NC42 400 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 PIGOQ8TEQ8 1089 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 MSLNLQ96KJ4 702 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 CCDC43Q96MW1 224 aaKnown RBP12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 TCF25Q9BQ70 676 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 APOL5Q9BWW9 433 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 GBP3Q9H0R5 595 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 XPNPEP1Q9NQW7 623 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 SPG21Q9NZD8 308 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 C2orf16Q68DN1 1984 aa12.61□□□□□ -0.39
NIPAL3-207ENST00000488155 PI4K2BG5E9Z4 385 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 FSCN2O14926 492 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 PLCB3Q01970 1234 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 KRT17Q04695 432 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 DUSP6Q16828 381 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 C8orf34Q49A92 452 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 TMEM31Q5JXX7 168 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 ADHFE1Q8IWW8 467 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 SLC39A11Q8N1S5 342 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 TCP11Q8WWU5 503 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 MTMR9Q96QG7 549 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 HSD17B14Q9BPX1 270 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 C11orf16Q9NQ32 467 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 AGPAT5Q9NUQ2 364 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 PCDHB2Q9Y5E7 798 aa12.6□□□□□ -0.39
NIPAL3-207ENST00000488155 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 CITO14578 2027 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 OFD1O75665 1012 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 SKIP12755 728 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 PPM1AP35813 382 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 TECP42680 631 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 ALDH7A1P49419 539 aaKnown RBP12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 AFF1P51825 1210 aaKnown RBP12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 RNASELQ05823 741 aaKnown RBP12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 NOMO2Q5JPE7 1267 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 GLB1LQ6UWU2 654 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 SRGAP1Q7Z6B7 1085 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 TMEM173Q86WV6 379 aaPredicted RBP12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 EXOC8Q8IYI6 725 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 FAM184AQ8NB25 1140 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 ASAP3Q8TDY4 903 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 AUTS2Q8WXX7 1259 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 CPB2Q96IY4 423 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 KIF2CQ99661 725 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 MRPL9Q9BYD2 267 aaKnown RBP12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 NRDE2Q9H7Z3 1164 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 TBC1D13Q9NVG8 400 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 DNAJB4Q9UDY4 337 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 PRKAG3Q9UGI9 489 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 LZTS1Q9Y250 596 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 PPME1Q9Y570 386 aa12.59□□□□□ -0.39
NIPAL3-207ENST00000488155 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 INO80B-WBP1J3KQ70 363 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 ASAP2O43150 1006 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 USO1O60763 962 aaKnown RBP12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 ERLIN2O94905 339 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 HOXA11P31270 313 aaPredicted RBP12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 RARRES1P49788 294 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 RAB27AP51159 221 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 GNL2Q13823 731 aaKnown RBP12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 NBR1Q14596 966 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 UBXN11Q5T124 520 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 PDE12Q6L8Q7 609 aaKnown RBP12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 AGMOQ6ZNB7 445 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 ZNF280BQ86YH2 543 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 SMRP1Q8NCR6 262 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 PGBD4Q96DM1 585 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 TMEM169Q96HH4 297 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 ZSCAN31Q96LW9 406 aaPredicted RBP12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 APOL6Q9BWW8 343 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 NGRNQ9NPE2 291 aaKnown RBP12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 ANKEF1Q9NU02 776 aa12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 USP15Q9Y4E8 981 aaPredicted RBP12.58□□□□□ -0.4
NIPAL3-207ENST00000488155 TRIOO75962 3097 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms