RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 LRRC43Q8N309 656 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 COLGALT1Q8NBJ5 622 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 LPPQ93052 612 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 CWH43Q9H720 699 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 LAG3P18627 525 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 GLRA2P23416 452 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 KCNQ1P51787 676 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 PTENP60484 403 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 PDIA5Q14554 519 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 ECM1Q16610 540 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 PADI6Q6TGC4 694 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 DTHD1Q6ZMT9 781 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 SPPL3Q8TCT6 385 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 POF1BQ8WVV4 589 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 KIAA1024Q9UPX6 916 aa26.34■■□□□ 1.81
RNF38-208ENST00000488058 VPS37CA5D8V6 355 aaPredicted RBP26.33■■□□□ 1.81
RNF38-208ENST00000488058 PP2D1A8MPX8 630 aa26.33■■□□□ 1.81
RNF38-208ENST00000488058 PRPHP41219 470 aa26.33■■□□□ 1.81
RNF38-208ENST00000488058 RAB27AP51159 221 aa26.33■■□□□ 1.81
RNF38-208ENST00000488058 LRRC55Q6ZSA7 311 aa26.33■■□□□ 1.81
RNF38-208ENST00000488058 IGSF22Q8N9C0 903 aa26.33■■□□□ 1.81
RNF38-208ENST00000488058 MCPH1Q8NEM0 835 aa26.33■■□□□ 1.81
RNF38-208ENST00000488058 TRAIPQ9BWF2 469 aa26.33■■□□□ 1.81
RNF38-208ENST00000488058 UBE2ZQ9H832 354 aaPredicted RBP26.33■■□□□ 1.81
RNF38-208ENST00000488058 DDX19AQ9NUU7 478 aaKnown RBP26.33■■□□□ 1.81
RNF38-208ENST00000488058 STK24Q9Y6E0 443 aa26.33■■□□□ 1.81
RNF38-208ENST00000488058 LRRIQ4A6NIV6 560 aa26.32■■□□□ 1.8
RNF38-208ENST00000488058 MUTP22033 750 aa26.32■■□□□ 1.8
RNF38-208ENST00000488058 DNAJB1P25685 340 aa26.32■■□□□ 1.8
RNF38-208ENST00000488058 IL17AQ16552 155 aa26.32■■□□□ 1.8
RNF38-208ENST00000488058 KRT79Q5XKE5 535 aa26.32■■□□□ 1.8
RNF38-208ENST00000488058 INPP5FQ9Y2H2 1132 aa26.32■■□□□ 1.8
RNF38-208ENST00000488058 PCDHB2Q9Y5E7 798 aa26.32■■□□□ 1.8
RNF38-208ENST00000488058 TCF20Q9UGU0 1960 aaKnown RBP26.32■■□□□ 1.8
RNF38-208ENST00000488058 FGF18O76093 207 aa26.31■■□□□ 1.8
RNF38-208ENST00000488058 CDC25AP30304 524 aa26.31■■□□□ 1.8
RNF38-208ENST00000488058 ATP2C1P98194 919 aaPredicted RBP26.31■■□□□ 1.8
RNF38-208ENST00000488058 ZRSR1Q15695 479 aaKnown RBP26.31■■□□□ 1.8
RNF38-208ENST00000488058 PGBD4Q96DM1 585 aa26.31■■□□□ 1.8
RNF38-208ENST00000488058 CPB2Q96IY4 423 aa26.31■■□□□ 1.8
RNF38-208ENST00000488058 MRPL9Q9BYD2 267 aaKnown RBP26.31■■□□□ 1.8
RNF38-208ENST00000488058 BHMT2Q9H2M3 363 aa26.31■■□□□ 1.8
RNF38-208ENST00000488058 FOXD4L1Q9NU39 408 aa26.31■■□□□ 1.8
RNF38-208ENST00000488058 REV3LO60673 3130 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 MEIS3P2A8K0S8 358 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 TSPAN1O60635 241 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 KCNA5P22460 613 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 PBX3P40426 434 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 MBTD1Q05BQ5 628 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 NCBP1Q09161 790 aaKnown RBP26.3■■□□□ 1.8
RNF38-208ENST00000488058 CAMK1Q14012 370 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 CSPP1Q1MSJ5 1256 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 IFNLR1Q8IU57 520 aaPredicted RBP26.3■■□□□ 1.8
RNF38-208ENST00000488058 ADAMTS19Q8TE59 1207 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 ZNF558Q96NG5 402 aa26.3■■□□□ 1.8
RNF38-208ENST00000488058 VWA3AA6NCI4 1184 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 CYP11B2P19099 503 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 HOXA11P31270 313 aaPredicted RBP26.29■■□□□ 1.8
RNF38-208ENST00000488058 IRS1P35568 1242 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 POU5F1BQ06416 359 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 UBXN11Q5T124 520 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 KCNT2Q6UVM3 1135 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 GLB1LQ6UWU2 654 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 MICAL1Q8TDZ2 1067 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 IGFLR1Q9H665 355 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 CLDND1Q9NY35 253 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 MYO7AQ13402 2215 aa26.29■■□□□ 1.8
RNF38-208ENST00000488058 E9PMD0 336 aa26.28■■□□□ 1.8
RNF38-208ENST00000488058 ZNF623O75123 536 aa26.28■■□□□ 1.8
RNF38-208ENST00000488058 PDCP20941 246 aa26.28■■□□□ 1.8
RNF38-208ENST00000488058 PCBP1Q15365 356 aaKnown RBP eCLIP26.28■■□□□ 1.8
RNF38-208ENST00000488058 NOTUMQ6P988 496 aa26.28■■□□□ 1.8
RNF38-208ENST00000488058 ZBTB8OSQ8IWT0 167 aa26.28■■□□□ 1.8
RNF38-208ENST00000488058 POLD4Q9HCU8 107 aa26.28■■□□□ 1.8
RNF38-208ENST00000488058 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.27■■□□□ 1.8
RNF38-208ENST00000488058 K7ELQ4 463 aaPredicted RBP26.27■■□□□ 1.8
RNF38-208ENST00000488058 BMP1P13497 986 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 AXLP30530 894 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 UBE3AQ05086 875 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 HYAL1Q12794 435 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 BRAPQ7Z569 592 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 BSNDQ8WZ55 320 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 PPP2R3CQ969Q6 453 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 NFKBIZQ9BYH8 718 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 TLR9Q9NR96 1032 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 DNM3Q9UQ16 869 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 PCDHGC5Q9Y5F6 944 aa26.27■■□□□ 1.8
RNF38-208ENST00000488058 B4GALT5O43286 388 aa26.26■■□□□ 1.79
RNF38-208ENST00000488058 ARF4P18085 180 aaPredicted RBP26.26■■□□□ 1.79
RNF38-208ENST00000488058 LIG1P18858 919 aa26.26■■□□□ 1.79
RNF38-208ENST00000488058 GTF2F1P35269 517 aaKnown RBP eCLIP26.26■■□□□ 1.79
RNF38-208ENST00000488058 RNASELQ05823 741 aaKnown RBP26.26■■□□□ 1.79
RNF38-208ENST00000488058 NOMO2Q5JPE7 1267 aa26.26■■□□□ 1.79
RNF38-208ENST00000488058 ADGRD2Q7Z7M1 963 aa26.26■■□□□ 1.79
RNF38-208ENST00000488058 PABPC5Q96DU9 382 aaKnown RBP26.26■■□□□ 1.79
RNF38-208ENST00000488058 UHRF1Q96T88 793 aaPredicted RBP26.26■■□□□ 1.79
RNF38-208ENST00000488058 EIF2AQ9BY44 585 aaKnown RBP26.26■■□□□ 1.79
RNF38-208ENST00000488058 GBP3Q9H0R5 595 aa26.26■■□□□ 1.79
RNF38-208ENST00000488058 RSAD1Q9HA92 442 aa26.26■■□□□ 1.79
RNF38-208ENST00000488058 H3BQ06 376 aaPredicted RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms