RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 CD58P19256 250 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 EIF3BP55884 814 aaKnown RBP12.7□□□□□ -0.38
TRA2B-214ENST00000487615 ZNF211Q13398 564 aaPredicted RBP12.7□□□□□ -0.38
TRA2B-214ENST00000487615 NEDD9Q14511 834 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 NPY5RQ15761 445 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 RSRC2Q7L4I2 434 aaKnown RBP12.7□□□□□ -0.38
TRA2B-214ENST00000487615 ENOSF1Q7L5Y1 443 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 CACNA2D3Q8IZS8 1091 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 ZNF564Q8TBZ8 553 aaPredicted RBP12.7□□□□□ -0.38
TRA2B-214ENST00000487615 NXF1Q9UBU9 619 aaKnown RBP12.7□□□□□ -0.38
TRA2B-214ENST00000487615 PLAAQ9Y263 795 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 ROBO1Q9Y6N7 1651 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 ARP10275 920 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 SLMAPQ14BN4 828 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 PNKPQ96T60 521 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 TXNDC16Q9P2K2 825 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 ALDH3A1P30838 453 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 MEA1Q16626 185 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
TRA2B-214ENST00000487615 ANKRD42Q8N9B4 389 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 GIMAP7Q8NHV1 300 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 CYP2W1Q8TAV3 490 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 MGARPQ8TDB4 240 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 TCP11Q8WWU5 503 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 HAS1Q92839 578 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 NLRP4Q96MN2 994 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 DEFB129Q9H1M3 183 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 RBM12Q9NTZ6 932 aaKnown RBP12.7□□□□□ -0.38
TRA2B-214ENST00000487615 SLC5A4Q9NY91 659 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 ADAM22Q9P0K1 906 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 AKT3Q9Y243 479 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 SCINQ9Y6U3 715 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 CASZ1Q86V15 1759 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 C19orf81C9J6K1 198 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 PON1P27169 355 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 CASP4P49662 377 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 GABPAQ06546 454 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 MMGT1Q8N4V1 131 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 OLFML3Q9NRN5 406 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 GINM1Q9NU53 330 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 SMARCAL1Q9NZC9 954 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 HESX1Q9UBX0 185 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 NAGPAQ9UK23 515 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 AKAP3O75969 853 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 RPS12P25398 132 aaKnown RBP12.69□□□□□ -0.38
TRA2B-214ENST00000487615 HNRNPH2P55795 449 aaKnown RBP12.69□□□□□ -0.38
TRA2B-214ENST00000487615 OSTNP61366 133 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 MAPK6Q16659 721 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 PLA2G4FQ68DD2 849 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 FAM83AQ86UY5 434 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 ZNF507Q8TCN5 953 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 P3H4Q92791 437 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 NUP85Q9BW27 656 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 SNX24Q9Y343 169 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 MAFGO15525 162 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 TAL1P17542 331 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-214ENST00000487615 STX2P32856 288 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 SNRNP35Q16560 246 aaKnown RBP12.69□□□□□ -0.38
TRA2B-214ENST00000487615 XKR3Q5GH77 459 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 ATG4CQ96DT6 458 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 MMTAG2Q9BU76 263 aaKnown RBP12.69□□□□□ -0.38
TRA2B-214ENST00000487615 NUP188Q5SRE5 1749 aa12.69□□□□□ -0.38
TRA2B-214ENST00000487615 GOLGA8SH3BPF8 625 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 WDR93Q6P2C0 686 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 XRRA1Q6P2D8 792 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 TMEM270Q6UE05 265 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 CCDC63Q8NA47 563 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 MORC4Q8TE76 937 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 RNPC3Q96LT9 517 aaKnown RBP12.68□□□□□ -0.38
TRA2B-214ENST00000487615 TAAR1Q96RJ0 339 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 FUT8Q9BYC5 575 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 NOVA2Q9UNW9 492 aaKnown RBP12.68□□□□□ -0.38
TRA2B-214ENST00000487615 CYP26A1O43174 497 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 SART1O43290 800 aaKnown RBP12.68□□□□□ -0.38
TRA2B-214ENST00000487615 PRLRP16471 622 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 TKFCQ3LXA3 575 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 CYFIP1Q7L576 1253 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 THNSL1Q8IYQ7 743 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 SLC35G2Q8TBE7 412 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 PSPC1Q8WXF1 523 aaKnown RBP12.68□□□□□ -0.38
TRA2B-214ENST00000487615 TSNARE1Q96NA8 513 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 ANKEF1Q9NU02 776 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 AMACRQ9UHK6 382 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 AGO2Q9UKV8 859 aaKnown RBP12.68□□□□□ -0.38
TRA2B-214ENST00000487615 TRAF3IP3Q9Y228 551 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 GMPSP49915 693 aaPredicted RBP12.68□□□□□ -0.38
TRA2B-214ENST00000487615 NPEPPSP55786 919 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 BEND6Q5SZJ8 279 aaPredicted RBP12.68□□□□□ -0.38
TRA2B-214ENST00000487615 HHATQ5VTY9 493 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 HSD3B7Q9H2F3 369 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 KCNMB3Q9NPA1 279 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 SYNPO2Q9UMS6 1093 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 P4HA2O15460 535 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 RTN2O75298 545 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 KRT1P04264 644 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 SLURP2P0DP57 97 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 SNHG28P0DPA3 235 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 PBX1P40424 430 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms