RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 VEGFAP15692 232 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-209ENST00000487188 KRT15P19012 456 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 VPS41P49754 854 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 SCNN1BP51168 640 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 GALCP54803 685 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 DYNLL1P63167 89 aaKnown RBP6.7□□□□□ -1.34
VPS13D-209ENST00000487188 COASYQ13057 564 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 TNIP1Q15025 636 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 NT5DC3Q86UY8 548 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 ECHDC2Q86YB7 292 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 PNMA1Q8ND90 353 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 ATP8B4Q8TF62 1192 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 SCG3Q8WXD2 468 aaKnown RBP6.7□□□□□ -1.34
VPS13D-209ENST00000487188 RFFLQ8WZ73 363 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 MAGEB18Q96M61 343 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 ISCA1Q9BUE6 129 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 TBC1D10AQ9BXI6 508 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 CRNKL1Q9BZJ0 848 aaKnown RBP6.7□□□□□ -1.34
VPS13D-209ENST00000487188 FAM192AQ9GZU8 254 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 ADAM7Q9H2U9 754 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 MMADHCQ9H3L0 296 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-209ENST00000487188 KCNMB3Q9NPA1 279 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 ANGPTL2Q9UKU9 493 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 AXIN2Q9Y2T1 843 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 ARFGEF2Q9Y6D5 1785 aa6.7□□□□□ -1.34
VPS13D-209ENST00000487188 BTNL10A8MVZ5 291 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 KIAA0391O15091 583 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 BAG2O95816 211 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 RARGP13631 454 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 LMNB1P20700 586 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 RPL21P46778 160 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 CACNB1Q02641 598 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 DNAJC3Q13217 504 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 TRMT10CQ7L0Y3 403 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 EPM2AIP1Q7L775 607 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 RASGEF1CQ8N431 466 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 LRRC57Q8N9N7 239 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 SUPT20HQ8NEM7 779 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 INPP5DQ92835 1189 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 MRRFQ96E11 262 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 HIC2Q96JB3 615 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 SERPINB12Q96P63 405 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 OLFM3Q96PB7 478 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 KIAA1683Q9H0B3 1180 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 TMEM165Q9HC07 324 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 ATXN10Q9UBB4 475 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 MYH1P12882 1939 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 MYH2Q9UKX2 1941 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 SMCO2A6NFE2 343 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 RASA4BC9J798 803 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 GYG2O15488 501 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 RASA4O43374 803 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 CBX6O95503 412 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 TTLL1O95922 423 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 PCP11498 1178 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 UCHL3P15374 230 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 SLC9A1P19634 815 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 KLRC3Q07444 240 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 MKRN4PQ13434 485 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 LLGL1Q15334 1064 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 MTFR1Q15390 333 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 PHLDB2Q86SQ0 1253 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 RAD54LQ92698 747 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 CDC42EP4Q9H3Q1 356 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 GCNT4Q9P109 453 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 NFAT5O94916 1531 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 RGPD2P0DJD1 1756 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 C5P01031 1676 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 PARP4Q9UKK3 1724 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 MYH4Q9Y623 1939 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 GPR75-ASB3A0A0A6YYF3 556 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 POTEMA6NI47 508 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 SMIM22K7EJ46 135 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 ADAMTS3O15072 1205 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 NOL4O94818 638 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 FAM200BP0CF97 657 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 CCNB1P14635 433 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 GNAZP19086 355 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 CETN2P41208 172 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 TNNI2P48788 182 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 SPARCL1Q14515 664 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 KPNB1Q14974 876 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 LRRC74BQ6ZQY2 392 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 ASRGL1Q7L266 308 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 MYLK4Q86YV6 388 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 REXO1Q8N1G1 1221 aaKnown RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 NME8Q8N427 588 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 CFAP61Q8NHU2 1237 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 SLC35G2Q8TBE7 412 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 TBCKQ8TEA7 893 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 PLVAPQ9BX97 442 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 OSGEPQ9NPF4 335 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 BIN2Q9UBW5 565 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-209ENST00000487188 ASB3Q9Y575 518 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 PFASO15067 1338 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 RPTORQ8N122 1335 aa6.69□□□□□ -1.34
VPS13D-209ENST00000487188 PDE8AO60658 829 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms