RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 MXD4Q14582 209 aaPredicted RBP21.28■■□□□ 1
CLIP2-206ENST00000487091 MICAL1Q8TDZ2 1067 aa21.28■■□□□ 1
CLIP2-206ENST00000487091 XPNPEP1Q9NQW7 623 aa21.28■■□□□ 1
CLIP2-206ENST00000487091 BMP2KQ9NSY1 1161 aaPredicted RBP21.28■■□□□ 1
CLIP2-206ENST00000487091 FSD2A1L4K1 749 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 FSCN2O14926 492 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 LINC01565O15544 149 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 TBX10O75333 385 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 NRIP1P48552 1158 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 RARRES1P49788 294 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 ERVFC1P60507 584 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 KRT17Q04695 432 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 POU5F1BQ06416 359 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 RABEP1Q15276 862 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 PCBP1Q15365 356 aaKnown RBP eCLIP21.27■■□□□ 1
CLIP2-206ENST00000487091 RNF149Q8NC42 400 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 CDCA3Q99618 268 aaPredicted RBP21.27■■□□□ 1
CLIP2-206ENST00000487091 TLE6Q9H808 572 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 MINDY3Q9H8M7 445 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 CD320Q9NPF0 282 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 SPG21Q9NZD8 308 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 PRKAG3Q9UGI9 489 aa21.27■■□□□ 1
CLIP2-206ENST00000487091 CARNS1A5YM72 827 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 POTEMA6NI47 508 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 TRAPPC10P48553 1259 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 NDUFV1P49821 464 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 IFNLR1Q8IU57 520 aaPredicted RBP21.26■□□□□ 0.99
CLIP2-206ENST00000487091 NOSTRINQ8IVI9 506 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 GJD3Q8N144 294 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 PGBD4Q96DM1 585 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 C1QTNF1Q9BXJ1 281 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 TUFT1Q9NNX1 390 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 CD207Q9UJ71 328 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 PCDHGC5Q9Y5F6 944 aa21.26■□□□□ 0.99
CLIP2-206ENST00000487091 MBTPS2O43462 519 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 OR52Z1P0C646 297 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 SPATA31C1P0DKV0 1188 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 HOXA11P31270 313 aaPredicted RBP21.25■□□□□ 0.99
CLIP2-206ENST00000487091 PTENP60484 403 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 SMAD4Q13485 552 aaKnown RBP21.25■□□□□ 0.99
CLIP2-206ENST00000487091 TFDP1Q14186 410 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 ZNF174Q15697 407 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 SMAD2Q15796 467 aaKnown RBP21.25■□□□□ 0.99
CLIP2-206ENST00000487091 GLB1LQ6UWU2 654 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 MRPL10Q7Z7H8 261 aaKnown RBP21.25■□□□□ 0.99
CLIP2-206ENST00000487091 RBM23Q86U06 439 aaKnown RBP21.25■□□□□ 0.99
CLIP2-206ENST00000487091 SLC39A11Q8N1S5 342 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 MSLNLQ96KJ4 702 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 CCDC43Q96MW1 224 aaKnown RBP21.25■□□□□ 0.99
CLIP2-206ENST00000487091 POLR3CQ9BUI4 534 aaPredicted RBP21.25■□□□□ 0.99
CLIP2-206ENST00000487091 NGRNQ9NPE2 291 aaKnown RBP21.25■□□□□ 0.99
CLIP2-206ENST00000487091 PCDHB2Q9Y5E7 798 aa21.25■□□□□ 0.99
CLIP2-206ENST00000487091 OFD1O75665 1012 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 EYA4O95677 639 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 AXLP30530 894 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 ARL2P36404 184 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 PBX3P40426 434 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 TECP42680 631 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 ALDH7A1P49419 539 aaKnown RBP21.24■□□□□ 0.99
CLIP2-206ENST00000487091 GNL2Q13823 731 aaKnown RBP21.24■□□□□ 0.99
CLIP2-206ENST00000487091 DUSP6Q16828 381 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 NOMO2Q5JPE7 1267 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 TTC38Q5R3I4 469 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 CATSPER3Q86XQ3 398 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 PIGOQ8TEQ8 1089 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 LPPQ93052 612 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 CLEC1BQ9P126 229 aa21.24■□□□□ 0.99
CLIP2-206ENST00000487091 ST18O60284 1047 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 ERLIN2O94905 339 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 GLP2RO95838 553 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 U2AF2P26368 475 aaKnown RBP eCLIP21.23■□□□□ 0.99
CLIP2-206ENST00000487091 RPA1P27694 616 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 BCAR1P56945 870 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 ZP2Q05996 745 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 COASYQ13057 564 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 CLUL1Q15846 466 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 ADHFE1Q8IWW8 467 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 CNNM3Q8NE01 707 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 ERMNQ8TAM6 284 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 NACC1Q96RE7 527 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 TCF25Q9BQ70 676 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 NFKBIZQ9BYH8 718 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 EPHX3Q9H6B9 360 aa21.23■□□□□ 0.99
CLIP2-206ENST00000487091 DBR1Q9UK59 544 aaKnown RBP21.23■□□□□ 0.99
CLIP2-206ENST00000487091 NOL7Q9UMY1 257 aaKnown RBP21.23■□□□□ 0.99
CLIP2-206ENST00000487091 C19orf67A6NJJ6 358 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 MEIS3P2A8K0S8 358 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 PER2O15055 1255 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 MED24O75448 989 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 SSTR3P32745 418 aaPredicted RBP21.22■□□□□ 0.99
CLIP2-206ENST00000487091 NCBP1Q09161 790 aaKnown RBP21.22■□□□□ 0.99
CLIP2-206ENST00000487091 CAPSQ13938 189 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 LONRF3Q496Y0 759 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 UBXN11Q5T124 520 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 PLPP4Q5VZY2 271 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 AGMOQ6ZNB7 445 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 ASAP3Q8TDY4 903 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 KHSRPQ92945 711 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLIP2-206ENST00000487091 CCDC51Q96ER9 411 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 ENTPD7Q9NQZ7 604 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms