RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 ZNF598Q86UK7 904 aaKnown RBP24.83■■□□□ 1.57
CDHR3-212ENST00000487084 HELQQ8TDG4 1101 aa24.83■■□□□ 1.57
CDHR3-212ENST00000487084 LPPQ93052 612 aa24.83■■□□□ 1.57
CDHR3-212ENST00000487084 CASD1Q96PB1 797 aa24.83■■□□□ 1.57
CDHR3-212ENST00000487084 ALG13Q9NP73 1137 aaKnown RBP24.83■■□□□ 1.57
CDHR3-212ENST00000487084 AAASQ9NRG9 546 aa24.83■■□□□ 1.57
CDHR3-212ENST00000487084 DNM3Q9UQ16 869 aa24.83■■□□□ 1.57
CDHR3-212ENST00000487084 E9PMD0 336 aa24.82■■□□□ 1.56
CDHR3-212ENST00000487084 BMP15O95972 392 aa24.82■■□□□ 1.56
CDHR3-212ENST00000487084 RAB27AP51159 221 aa24.82■■□□□ 1.56
CDHR3-212ENST00000487084 MBTD1Q05BQ5 628 aa24.82■■□□□ 1.56
CDHR3-212ENST00000487084 POU5F1BQ06416 359 aa24.82■■□□□ 1.56
CDHR3-212ENST00000487084 SF3A1Q15459 793 aaKnown RBP24.82■■□□□ 1.56
CDHR3-212ENST00000487084 LRRC43Q8N309 656 aa24.82■■□□□ 1.56
CDHR3-212ENST00000487084 KLHL23Q8NBE8 558 aa24.82■■□□□ 1.56
CDHR3-212ENST00000487084 MMTAG2Q9BU76 263 aaKnown RBP24.82■■□□□ 1.56
CDHR3-212ENST00000487084 PCDHB12Q9Y5F1 795 aa24.82■■□□□ 1.56
CDHR3-212ENST00000487084 TSPAN1O60635 241 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 HSP90AA1P07900 732 aaKnown RBP24.81■■□□□ 1.56
CDHR3-212ENST00000487084 NCBP1Q09161 790 aaKnown RBP24.81■■□□□ 1.56
CDHR3-212ENST00000487084 TIGD5Q53EQ6 642 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 IFNLR1Q8IU57 520 aaPredicted RBP24.81■■□□□ 1.56
CDHR3-212ENST00000487084 P2RX5Q93086 422 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 CPB2Q96IY4 423 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 CDK5RAP3Q96JB5 506 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 PLIN2Q99541 437 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 TRAIPQ9BWF2 469 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 POLD4Q9HCU8 107 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 PLAGL2Q9UPG8 496 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 PCDHB2Q9Y5E7 798 aa24.81■■□□□ 1.56
CDHR3-212ENST00000487084 FNDC1Q4ZHG4 1894 aaPredicted RBP24.81■■□□□ 1.56
CDHR3-212ENST00000487084 EYA4O95677 639 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 ITGB1P05556 798 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 HOXA11P31270 313 aaPredicted RBP24.8■■□□□ 1.56
CDHR3-212ENST00000487084 RESTQ13127 1097 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 PCBP1Q15365 356 aaKnown RBP eCLIP24.8■■□□□ 1.56
CDHR3-212ENST00000487084 NAALADL2Q58DX5 795 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 ZBTB8OSQ8IWT0 167 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 THNSL1Q8IYQ7 743 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 COLGALT1Q8NBJ5 622 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 BSNDQ8WZ55 320 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 CWH43Q9H720 699 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 MTMR6Q9Y217 621 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 INPP5FQ9Y2H2 1132 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 UNC80Q8N2C7 3258 aa24.8■■□□□ 1.56
CDHR3-212ENST00000487084 STX6O43752 255 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 LAG3P18627 525 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 FAM173BQ6P4H8 233 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 NOTUMQ6P988 496 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 LRRC55Q6ZSA7 311 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 KCNK18Q7Z418 384 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 PGBD4Q96DM1 585 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 NFKBIZQ9BYH8 718 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 LMAN2LQ9H0V9 348 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 KIAA1671Q9BY89 1806 aa24.79■■□□□ 1.56
CDHR3-212ENST00000487084 MEIS3P2A8K0S8 358 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 B4GALT5O43286 388 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 SSBP05455 408 aaKnown RBP eCLIP24.78■■□□□ 1.56
CDHR3-212ENST00000487084 LIG1P18858 919 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 AXLP30530 894 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 TCEAL5Q5H9L2 206 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 UBXN11Q5T124 520 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 GLB1LQ6UWU2 654 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 CABP7Q86V35 215 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 DEPTORQ8TB45 409 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 IFT74Q96LB3 600 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 MRPL9Q9BYD2 267 aaKnown RBP24.78■■□□□ 1.56
CDHR3-212ENST00000487084 NT5C3AQ9H0P0 336 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 NSUN3Q9H649 340 aaKnown RBP24.78■■□□□ 1.56
CDHR3-212ENST00000487084 CLIC4Q9Y696 253 aa24.78■■□□□ 1.56
CDHR3-212ENST00000487084 ZNF623O75123 536 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 PBX3P40426 434 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 MRPS5P82675 430 aaKnown RBP24.77■■□□□ 1.56
CDHR3-212ENST00000487084 TFF2Q03403 129 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 CEBPZQ03701 1054 aaKnown RBP24.77■■□□□ 1.56
CDHR3-212ENST00000487084 PPP2R5AQ15172 486 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 AMHR2Q16671 573 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 TMEM132AQ24JP5 1023 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 RASSF8Q8NHQ8 419 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 SPPL3Q8TCT6 385 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 POF1BQ8WVV4 589 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 ATXN2LQ8WWM7 1075 aaKnown RBP24.77■■□□□ 1.56
CDHR3-212ENST00000487084 KIFAP3Q92845 792 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 HLA-CQ95604 372 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 AK8Q96MA6 479 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 PNMA5Q96PV4 448 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 EIF2AQ9BY44 585 aaKnown RBP24.77■■□□□ 1.56
CDHR3-212ENST00000487084 C2orf40Q9H1Z8 148 aa24.77■■□□□ 1.56
CDHR3-212ENST00000487084 ARF4P18085 180 aaPredicted RBP24.76■■□□□ 1.55
CDHR3-212ENST00000487084 NAMPTP43490 491 aa24.76■■□□□ 1.55
CDHR3-212ENST00000487084 GRIN1Q05586 938 aa24.76■■□□□ 1.55
CDHR3-212ENST00000487084 CSPP1Q1MSJ5 1256 aa24.76■■□□□ 1.55
CDHR3-212ENST00000487084 HYIQ5T013 277 aa24.76■■□□□ 1.55
CDHR3-212ENST00000487084 CDCA2Q69YH5 1023 aaPredicted RBP24.76■■□□□ 1.55
CDHR3-212ENST00000487084 CCDC51Q96ER9 411 aa24.76■■□□□ 1.55
CDHR3-212ENST00000487084 ZNF558Q96NG5 402 aa24.76■■□□□ 1.55
CDHR3-212ENST00000487084 KIFC3Q9BVG8 833 aa24.76■■□□□ 1.55
CDHR3-212ENST00000487084 RUSC1Q9BVN2 902 aa24.76■■□□□ 1.55
CDHR3-212ENST00000487084 TRIM6Q9C030 488 aaPredicted RBP24.76■■□□□ 1.55
CDHR3-212ENST00000487084 COG5Q9UP83 839 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms