RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ODF2LQ9ULJ1 636 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 ABCC6O95255 1503 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 CTNND1O60716 968 aaKnown RBP14.25□□□□□ -0.13
HMGN1-216ENST00000486741 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-216ENST00000486741 COPB2P35606 906 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 IFNAR2P48551 515 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 SNRNP35Q16560 246 aaKnown RBP14.25□□□□□ -0.13
HMGN1-216ENST00000486741 C2CD6Q53TS8 623 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 OTOP1Q7RTM1 612 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 YDJCA8MPS7 323 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 NNTQ13423 1086 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 DNAJC19Q96DA6 116 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 DNAI2Q9GZS0 605 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 A0A1W2PQJ5 194 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 PLS3P13797 630 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 CCDC121Q6ZUS5 278 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 DDX42Q86XP3 938 aaKnown RBP eCLIP14.24□□□□□ -0.134e-6■□□□□ 10.9
HMGN1-216ENST00000486741 CBWD2Q8IUF1 395 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 TRIM59Q8IWR1 403 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 SLC17A8Q8NDX2 589 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 SYNJ2BP-COX16A0A087WUM0 186 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 GPC5P78333 572 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 DR1Q01658 176 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 MUM1L1Q5H9M0 696 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-216ENST00000486741 SLC35G2Q8TBE7 412 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 SYTL5Q8TDW5 730 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-216ENST00000486741 MKL1Q969V6 931 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 VPS37BQ9H9H4 285 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 RAB20Q9NX57 234 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 COX16Q9P0S2 106 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 NOC2LQ9Y3T9 749 aaKnown RBP14.24□□□□□ -0.13
HMGN1-216ENST00000486741 BAZ2AQ9UIF9 1905 aaKnown RBP14.24□□□□□ -0.13
HMGN1-216ENST00000486741 GGPS1O95749 300 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 BPIFB4P59827 614 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 PRKCEQ02156 737 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 C7orf31Q8N865 590 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 FBXL13Q8NEE6 735 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 MTMR8Q96EF0 704 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 SLIT2O94813 1529 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 RCCD1A6NED2 376 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 FOXN3O00409 490 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-216ENST00000486741 MTMR3Q13615 1198 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 Q4G0T1 1027 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 CYP4F22Q6NT55 531 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 WDR59Q6PJI9 974 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 TMEM139Q8IV31 216 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 NLRP7Q8WX94 980 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 ADPGKQ9BRR6 497 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 NUP85Q9BW27 656 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 STK33Q9BYT3 514 aa14.24□□□□□ -0.13
HMGN1-216ENST00000486741 CNGA1P29973 690 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 AGPAT1Q99943 283 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 ADAM22Q9P0K1 906 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 AGO2Q9UKV8 859 aaKnown RBP14.23□□□□□ -0.13
HMGN1-216ENST00000486741 GOLGA8KD6RF30 607 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 ZBTB22O15209 634 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 H2AFXP16104 143 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-216ENST00000486741 MOXD1Q6UVY6 613 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 ZNF720Q7Z2F6 126 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 RNF149Q8NC42 400 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 ZNF507Q8TCN5 953 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 WDR18Q9BV38 432 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 STMN4Q9H169 189 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-216ENST00000486741 RBAKQ9NYW8 714 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-216ENST00000486741 DMGDHQ9UI17 866 aaKnown RBP14.23□□□□□ -0.13
HMGN1-216ENST00000486741 NAGPAQ9UK23 515 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 DAPK3O43293 454 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 KRT15P19012 456 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 STAT5BP51692 787 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 MIIPQ5JXC2 388 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 BSPRYQ5W0U4 402 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 LRRC71Q8N4P6 559 aa14.23□□□□□ -0.13
HMGN1-216ENST00000486741 IQCGQ9H095 443 aaKnown RBP14.23□□□□□ -0.13
HMGN1-216ENST00000486741 OSBPP22059 807 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 ARHGAP25P42331 645 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 SLC12A3P55017 1021 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 PDCLQ13371 301 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 MAPK6Q16659 721 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 PPP1R21Q6ZMI0 780 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 ZNF571Q7Z3V5 609 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-216ENST00000486741 RHOT2Q8IXI1 618 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 ZNF564Q8TBZ8 553 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-216ENST00000486741 CABS1Q96KC9 395 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 KCNMB3Q9NPA1 279 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 PHLPP1O60346 1717 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 SLC16A3O15427 465 aaKnown RBP14.22□□□□□ -0.13
HMGN1-216ENST00000486741 STAM2O75886 525 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 CARSP49589 748 aaKnown RBP14.22□□□□□ -0.13
HMGN1-216ENST00000486741 HNRNPH2P55795 449 aaKnown RBP14.22□□□□□ -0.13
HMGN1-216ENST00000486741 BACE1P56817 501 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 ZNF354CQ86Y25 554 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 CCDC89Q8N998 374 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 IL31RAQ8NI17 732 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 CPA5Q8WXQ8 436 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 RFFLQ8WZ73 363 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 RNF25Q96BH1 459 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-216ENST00000486741 FMO2Q99518 471 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 TARS2Q9BW92 718 aaKnown RBP14.22□□□□□ -0.13
HMGN1-216ENST00000486741 MOV10L1Q9BXT6 1211 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms