RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 GLRA2P23416 452 aa21.74■■□□□ 1.07
SNX5-213ENST00000486039 PHKA2P46019 1235 aa21.74■■□□□ 1.07
SNX5-213ENST00000486039 PTENP60484 403 aa21.74■■□□□ 1.07
SNX5-213ENST00000486039 TWF2Q6IBS0 349 aaKnown RBP21.74■■□□□ 1.07
SNX5-213ENST00000486039 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.74■■□□□ 1.07
SNX5-213ENST00000486039 SPPL3Q8TCT6 385 aa21.74■■□□□ 1.07
SNX5-213ENST00000486039 C1QTNF1Q9BXJ1 281 aa21.74■■□□□ 1.07
SNX5-213ENST00000486039 BRWD1Q9NSI6 2320 aa21.74■■□□□ 1.07
SNX5-213ENST00000486039 LAD1O00515 517 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 MUTP22033 750 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 DNAJB1P25685 340 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 HOXA11P31270 313 aaPredicted RBP21.73■■□□□ 1.07
SNX5-213ENST00000486039 CCT6AP40227 531 aaKnown RBP21.73■■□□□ 1.07
SNX5-213ENST00000486039 POU5F1BQ06416 359 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 CAPSQ13938 189 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 TCEAL5Q5H9L2 206 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 SPOUT1Q5T280 376 aaKnown RBP21.73■■□□□ 1.07
SNX5-213ENST00000486039 HAUS3Q68CZ6 603 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 MAEAQ7L5Y9 396 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 POLR3FQ9H1D9 316 aaPredicted RBP21.73■■□□□ 1.07
SNX5-213ENST00000486039 NSUN3Q9H649 340 aaKnown RBP21.73■■□□□ 1.07
SNX5-213ENST00000486039 GPRC5CQ9NQ84 441 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 FAM105AQ9NUU6 356 aa21.73■■□□□ 1.07
SNX5-213ENST00000486039 PRPHP41219 470 aa21.72■■□□□ 1.07
SNX5-213ENST00000486039 IFNLR1Q8IU57 520 aaPredicted RBP21.72■■□□□ 1.07
SNX5-213ENST00000486039 COLGALT1Q8NBJ5 622 aa21.72■■□□□ 1.07
SNX5-213ENST00000486039 HELQQ8TDG4 1101 aa21.72■■□□□ 1.07
SNX5-213ENST00000486039 LPPQ93052 612 aa21.72■■□□□ 1.07
SNX5-213ENST00000486039 MEIS3P2A8K0S8 358 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 PP2D1A8MPX8 630 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 ZNF623O75123 536 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 CSPG5O95196 566 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 ATP2C1P98194 919 aaPredicted RBP21.71■■□□□ 1.07
SNX5-213ENST00000486039 TFDP1Q14186 410 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 LONRF3Q496Y0 759 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 UBXN11Q5T124 520 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 PADI6Q6TGC4 694 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 DTHD1Q6ZMT9 781 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 ABI1Q8IZP0 508 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 LRRC43Q8N309 656 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 SNX29Q8TEQ0 813 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 POF1BQ8WVV4 589 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 PABPC5Q96DU9 382 aaKnown RBP21.71■■□□□ 1.07
SNX5-213ENST00000486039 EPHX3Q9H6B9 360 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 AAASQ9NRG9 546 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 KIAA1024Q9UPX6 916 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 PCDHB12Q9Y5F1 795 aa21.71■■□□□ 1.07
SNX5-213ENST00000486039 TSPAN1O60635 241 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 SKIP12755 728 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 CDC25AP30304 524 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 RAB27AP51159 221 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 MBTD1Q05BQ5 628 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 COL19A1Q14993 1142 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 PUS10Q3MIT2 529 aaKnown RBP21.7■■□□□ 1.06
SNX5-213ENST00000486039 PTCRAQ6ISU1 281 aaPredicted RBP21.7■■□□□ 1.06
SNX5-213ENST00000486039 MCPH1Q8NEM0 835 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 MMTAG2Q9BU76 263 aaKnown RBP21.7■■□□□ 1.06
SNX5-213ENST00000486039 NFKBIZQ9BYH8 718 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 RAB34Q9BZG1 259 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 PCDHB2Q9Y5E7 798 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 STK24Q9Y6E0 443 aa21.7■■□□□ 1.06
SNX5-213ENST00000486039 ARHGEF35A5YM69 484 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 INO80B-WBP1J3KQ70 363 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 FGF18O76093 207 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 IL9P15248 144 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 LAG3P18627 525 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 CYP11B2P19099 503 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 IRS1P35568 1242 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 PCBP1Q15365 356 aaKnown RBP eCLIP21.69■■□□□ 1.06
SNX5-213ENST00000486039 AMHR2Q16671 573 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 FAM178BQ8IXR5 827 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 BHMT2Q9H2M3 363 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 CD320Q9NPF0 282 aa21.69■■□□□ 1.06
SNX5-213ENST00000486039 DDX19AQ9NUU7 478 aaKnown RBP21.69■■□□□ 1.06
SNX5-213ENST00000486039 ATG2AQ2TAZ0 1938 aa21.68■■□□□ 1.06
SNX5-213ENST00000486039 GRXCR2A6NFK2 248 aa21.68■■□□□ 1.06
SNX5-213ENST00000486039 H3BQ06 376 aaPredicted RBP21.68■■□□□ 1.06
SNX5-213ENST00000486039 NCK2O43639 380 aa21.68■■□□□ 1.06
SNX5-213ENST00000486039 ERLIN2O94905 339 aa21.68■■□□□ 1.06
SNX5-213ENST00000486039 PBX3P40426 434 aa21.68■■□□□ 1.06
SNX5-213ENST00000486039 KRT79Q5XKE5 535 aa21.68■■□□□ 1.06
SNX5-213ENST00000486039 MRPL10Q7Z7H8 261 aaKnown RBP21.68■■□□□ 1.06
SNX5-213ENST00000486039 THNSL1Q8IYQ7 743 aa21.68■■□□□ 1.06
SNX5-213ENST00000486039 BSNDQ8WZ55 320 aa21.68■■□□□ 1.06
SNX5-213ENST00000486039 CPB2Q96IY4 423 aa21.68■■□□□ 1.06
SNX5-213ENST00000486039 E9PMD0 336 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 OFD1O75665 1012 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 AXLP30530 894 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 HYAL1Q12794 435 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 CSPP1Q1MSJ5 1256 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 KCNT2Q6UVM3 1135 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 AGMOQ6ZNB7 445 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 EP400NLQ6ZTU2 488 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 KHSRPQ92945 711 aaKnown RBP eCLIP21.67■■□□□ 1.06
SNX5-213ENST00000486039 MRPL9Q9BYD2 267 aaKnown RBP21.67■■□□□ 1.06
SNX5-213ENST00000486039 POLD4Q9HCU8 107 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 CLDND1Q9NY35 253 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 RAPGEFL1Q9UHV5 662 aa21.67■■□□□ 1.06
SNX5-213ENST00000486039 LRRIQ4A6NIV6 560 aa21.66■■□□□ 1.06
SNX5-213ENST00000486039 ARF4P18085 180 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms