RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SMARCC2Q8TAQ2 1214 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 SECISBP2LQ93073 1101 aaKnown RBP11.14□□□□□ -0.63
SND1-213ENST00000486037 ZNF707Q96C28 371 aaPredicted RBP11.14□□□□□ -0.63
SND1-213ENST00000486037 DDX23Q9BUQ8 820 aaKnown RBP11.14□□□□□ -0.63
SND1-213ENST00000486037 AZI2Q9H6S1 392 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 NRDE2Q9H7Z3 1164 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 JPH1Q9HDC5 661 aaPredicted RBP11.14□□□□□ -0.63
SND1-213ENST00000486037 MAN1C1Q9NR34 630 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 DNAJB4Q9UDY4 337 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 ZMIZ1Q9ULJ6 1067 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 MEIS3P2A8K0S8 358 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 C1QTNF9BB2RNN3 333 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 ZNF213O14771 459 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 INPPL1O15357 1258 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 PROS1P07225 676 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 GALTP07902 379 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 C1QTNF9P0C862 333 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 RPS6KB1P23443 525 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 PSMA5P28066 241 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 SLC11A1P49279 550 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 POLGP54098 1239 aaPredicted RBP11.13□□□□□ -0.63
SND1-213ENST00000486037 SHC2P98077 582 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 GRM4Q14833 912 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 UBXN2BQ14CS0 331 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 NONOQ15233 471 aaKnown RBP eCLIP11.13□□□□□ -0.633e-7■■■■□ 24.5
SND1-213ENST00000486037 LONRF3Q496Y0 759 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 IFIT1BQ5T764 474 aaKnown RBP11.13□□□□□ -0.63
SND1-213ENST00000486037 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 CYB5R4Q7L1T6 521 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 GET4Q7L5D6 327 aaPredicted RBP11.13□□□□□ -0.63
SND1-213ENST00000486037 PLPPR4Q7Z2D5 763 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 PPFIBP1Q86W92 1011 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 CMASQ8NFW8 434 aaPredicted RBP11.13□□□□□ -0.63
SND1-213ENST00000486037 FGF14Q92915 247 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 LPPQ93052 612 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 BCO2Q9BYV7 579 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 GMEB2Q9UKD1 530 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 CYP46A1Q9Y6A2 500 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 DMXL2Q8TDJ6 3036 aa11.13□□□□□ -0.63
SND1-213ENST00000486037 FAM170BA6NMN3 283 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
SND1-213ENST00000486037 TBC1D4O60343 1298 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 C22orf31O95567 290 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 TDGF1P13385 188 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 LAMP2P13473 410 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 ATP4AP20648 1035 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 AK2P54819 239 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 ITGB3BPQ13352 177 aaPredicted RBP11.12□□□□□ -0.63
SND1-213ENST00000486037 GIT2Q14161 759 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 BMS1Q14692 1282 aaKnown RBP11.12□□□□□ -0.63
SND1-213ENST00000486037 UBE2SQ16763 222 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 ODR4Q5SWX8 454 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 PARM1Q6UWI2 310 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 NXPE3Q969Y0 559 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 TCEANC2Q96MN5 208 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 ADAMTS10Q9H324 1103 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 LTB4R2Q9NPC1 389 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 JADE2Q9NQC1 790 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 PRMT8Q9NR22 394 aaPredicted RBP11.12□□□□□ -0.63
SND1-213ENST00000486037 PDRG1Q9NUG6 133 aa11.12□□□□□ -0.63
SND1-213ENST00000486037 IGKV6D-21A0A0A0MT36 114 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 A0A0U1RQF3 1178 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 SHISA7A6NL88 538 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 C2CD2LO14523 706 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 ZIC2O95409 532 aaPredicted RBP11.11□□□□□ -0.63
SND1-213ENST00000486037 CCNE2O96020 404 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 SPATA31D3P0C874 917 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 TARSP26639 723 aaKnown RBP11.11□□□□□ -0.63
SND1-213ENST00000486037 CLCN3P51790 818 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 FZD5Q13467 585 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 MLF2Q15773 248 aaPredicted RBP11.11□□□□□ -0.63
SND1-213ENST00000486037 PRR23CQ6ZRP0 262 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 SPATA31D4Q6ZUB0 917 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 TAS1R1Q7RTX1 841 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 ZNF280BQ86YH2 543 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 CCDC60Q8IWA6 550 aaPredicted RBP11.11□□□□□ -0.63
SND1-213ENST00000486037 MB21D2Q8IYB1 491 aaPredicted RBP11.11□□□□□ -0.63
SND1-213ENST00000486037 SMG7Q92540 1137 aaKnown RBP11.11□□□□□ -0.63
SND1-213ENST00000486037 BORCS6Q96GS4 357 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 CDHR1Q96JP9 859 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 GBP3Q9H0R5 595 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 SEMA4GQ9NTN9 838 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 TBC1D13Q9NVG8 400 aa11.11□□□□□ -0.63
SND1-213ENST00000486037 DSPP15924 2871 aaKnown RBP11.1□□□□□ -0.63
SND1-213ENST00000486037 HBP1O60381 514 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 CSDE1O75534 798 aaKnown RBP11.1□□□□□ -0.63
SND1-213ENST00000486037 ATG7O95352 703 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 ZSCAN20P17040 1043 aaPredicted RBP11.1□□□□□ -0.63
SND1-213ENST00000486037 MCM2P49736 904 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 EXOSC10Q01780 885 aaKnown RBP11.1□□□□□ -0.63
SND1-213ENST00000486037 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 FAM43BQ6ZT52 329 aaPredicted RBP11.1□□□□□ -0.63
SND1-213ENST00000486037 DHX32Q7L7V1 743 aaKnown RBP11.1□□□□□ -0.63
SND1-213ENST00000486037 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 STAMQ92783 540 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 UBAC1Q9BSL1 405 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 EMILIN2Q9BXX0 1053 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 MRPL9Q9BYD2 267 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms