RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 FAM89AQ96GI7 184 aa6.58□□□□□ -1.36
SMARCC1-207ENST00000485833 MSRAQ9UJ68 235 aa6.58□□□□□ -1.36
SMARCC1-207ENST00000485833 SYNPO2Q9UMS6 1093 aa6.58□□□□□ -1.36
SMARCC1-207ENST00000485833 ST20-MTHFSA0A0A6YYL1 179 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 ELL2O00472 640 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 HSD3B2P26439 372 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 LSP1P33241 339 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 MSX2P35548 267 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 BPIFB4P59827 614 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 FOXL1Q12952 345 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 GRM7Q14831 915 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 TERF2Q15554 542 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 MAMDC4Q6UXC1 1216 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 Q6ZSN1 163 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 FERMT2Q96AC1 680 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 ZNF496Q96IT1 587 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 NOL10Q9BSC4 688 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 AGO3Q9H9G7 860 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 LMTK3Q96Q04 1460 aa6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 PRG4Q92954 1404 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-207ENST00000485833 A0A1W2PRX2 142 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 ADAM8P78325 824 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 DHCR24Q15392 516 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 ZBTB41Q5SVQ8 909 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 SDE2Q6IQ49 451 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 ADGRE4PQ86SQ3 457 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 RNF180Q86T96 592 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 THNSL2Q86YJ6 484 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 ANKRD53Q8N9V6 530 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 PLA2G15Q8NCC3 412 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 HIST1H2AHQ96KK5 128 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 HIST1H2AJQ99878 128 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 SLKQ9H2G2 1235 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 EMC7Q9NPA0 242 aa6.56□□□□□ -1.36
SMARCC1-207ENST00000485833 ABCA10Q8WWZ4 1543 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 MYPNQ86TC9 1320 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 DAPK3O43293 454 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 PCDH8O95206 1070 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 HNRNPLP14866 589 aaKnown RBP eCLIP6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 ACAP1Q15027 740 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 ZNF808Q8N4W9 903 aaPredicted RBP6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 CDYL2Q8N8U2 506 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 TMEM176AQ96HP8 235 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 RPL10LQ96L21 214 aaKnown RBP6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 GPHA2Q96T91 129 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 OSBPL6Q9BZF3 934 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 MS4A5Q9H3V2 200 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 C14orf93Q9H972 538 aaKnown RBP6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 PCDHB6Q9Y5E3 794 aa6.55□□□□□ -1.36
SMARCC1-207ENST00000485833 A0A0A6YYK5 440 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 LCHNA4D1U4 455 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 TOX4O94842 621 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 PFKMP08237 780 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 VSIG10L2P0DP72 767 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 BPIP17213 487 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 DDB1Q16531 1140 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 MAN2A1Q16706 1144 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 CXorf67Q86X51 503 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 D2HGDHQ8N465 521 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 SLC5A5Q92911 643 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 USP7Q93009 1102 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 MPHOSPH9Q99550 1183 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 SOX7Q9BT81 388 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 TLR9Q9NR96 1032 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 RUSC2Q8N2Y8 1516 aa6.54□□□□□ -1.36
SMARCC1-207ENST00000485833 GOLGA8BA8MQT2 603 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 KDM1AO60341 852 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 FSBPO95073 299 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 ZXDAP98168 799 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 HHEXQ03014 270 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 ATP13A4Q4VNC1 1196 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 BROXQ5VW32 411 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 KRT40Q6A162 431 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 FRMD7Q6ZUT3 714 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 PPP1R14CQ8TAE6 165 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 IL23AQ9NPF7 189 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 PPP2R3BQ9Y5P8 575 aa6.53□□□□□ -1.36
SMARCC1-207ENST00000485833 CAPN14A8MX76 684 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 MTSS1O43312 755 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 RAB11FIP3O75154 756 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 JUNP05412 331 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 ACRV1P26436 265 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 KIR2DL3P43628 341 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 RNF207Q6ZRF8 634 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 GAREM2Q75VX8 874 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 DDX46Q7L014 1031 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 UNC5BQ8IZJ1 945 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 UIMC1Q96RL1 719 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 WNT8AQ9H1J5 351 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 VPS11Q9H270 941 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 IFT22Q9H7X7 185 aa6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMARCC1-207ENST00000485833 UBE2QL1A1L167 161 aa6.51□□□□□ -1.37
SMARCC1-207ENST00000485833 PRSS38A1L453 326 aa6.51□□□□□ -1.37
SMARCC1-207ENST00000485833 ZEB2O60315 1214 aa6.51□□□□□ -1.37
SMARCC1-207ENST00000485833 SEC24DO94855 1032 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-207ENST00000485833 GAAP10253 952 aa6.51□□□□□ -1.37
SMARCC1-207ENST00000485833 TACR2P21452 398 aa6.51□□□□□ -1.37
SMARCC1-207ENST00000485833 HIBADHP31937 336 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms