RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 IFT122Q9HBG6 1241 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 GDAQ9Y2T3 454 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 PCDHB13Q9Y5F0 798 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 DNAH12Q6ZR08 3092 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 CHRNA1P02708 482 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 CTSHP09668 335 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 SCP2P22307 547 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 EFNA5P52803 228 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 NLRP12P59046 1061 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 GTF2BQ00403 316 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 ALCAMQ13740 583 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 ZC2HC1CQ53FD0 456 aaPredicted RBP19.36■□□□□ 0.69
CHMP3-207ENST00000485465 ZNF618Q5T7W0 954 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 EPM2AIP1Q7L775 607 aaPredicted RBP19.36■□□□□ 0.69
CHMP3-207ENST00000485465 SMYD4Q8IYR2 804 aaPredicted RBP19.36■□□□□ 0.69
CHMP3-207ENST00000485465 KCNN1Q92952 543 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 OSMRQ99650 979 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 GCOM2Q9BZD3 368 aaPredicted RBP19.36■□□□□ 0.69
CHMP3-207ENST00000485465 TMEM134Q9H6X4 195 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 GINS2Q9Y248 185 aa19.36■□□□□ 0.69
CHMP3-207ENST00000485465 DENND3A2RUS2 1198 aa19.35■□□□□ 0.69
CHMP3-207ENST00000485465 EIF3DO15371 548 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHMP3-207ENST00000485465 PPP1R37O75864 691 aa19.35■□□□□ 0.69
CHMP3-207ENST00000485465 CLTBP09497 229 aa19.35■□□□□ 0.69
CHMP3-207ENST00000485465 DARSP14868 501 aaKnown RBP19.35■□□□□ 0.69
CHMP3-207ENST00000485465 ABCD1P33897 745 aa19.35■□□□□ 0.69
CHMP3-207ENST00000485465 STXBP4Q6ZWJ1 553 aa19.35■□□□□ 0.69
CHMP3-207ENST00000485465 SRGAP1Q7Z6B7 1085 aa19.35■□□□□ 0.69
CHMP3-207ENST00000485465 SCFD1Q8WVM8 642 aa19.35■□□□□ 0.69
CHMP3-207ENST00000485465 NOC4LQ9BVI4 516 aaKnown RBP19.35■□□□□ 0.69
CHMP3-207ENST00000485465 TBX21Q9UL17 535 aa19.35■□□□□ 0.69
CHMP3-207ENST00000485465 MYH11P35749 1972 aa19.35■□□□□ 0.69
CHMP3-207ENST00000485465 PHLPP2Q6ZVD8 1323 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 K7ERI5 159 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 PITPNM1O00562 1244 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 PRPF6O94906 941 aaKnown RBP19.34■□□□□ 0.69
CHMP3-207ENST00000485465 SELPP16109 830 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 EIF4BP23588 611 aaKnown RBP19.34■□□□□ 0.69
CHMP3-207ENST00000485465 MBTD1Q05BQ5 628 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 TYRO3Q06418 890 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 COBLL1Q53SF7 1204 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 TRAF7Q6Q0C0 670 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 TAS1R3Q7RTX0 852 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 MYOCDQ8IZQ8 938 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 ZNF507Q8TCN5 953 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 HVCN1Q96D96 273 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 INO80BQ9C086 356 aaPredicted RBP19.34■□□□□ 0.69
CHMP3-207ENST00000485465 CCDC113Q9H0I3 377 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 HIPK3Q9H422 1215 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 MINDY3Q9H8M7 445 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 TMEM39AQ9NV64 488 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 TBX20Q9UMR3 447 aa19.34■□□□□ 0.69
CHMP3-207ENST00000485465 UBE4BO95155 1302 aa19.33■□□□□ 0.69
CHMP3-207ENST00000485465 INO80B-WBP1J3KQ70 363 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 CSDE1O75534 798 aaKnown RBP19.33■□□□□ 0.68
CHMP3-207ENST00000485465 PRCPP42785 496 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 MAPK6Q16659 721 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 BMT2Q1RMZ1 405 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 L1TD1Q5T7N2 865 aaKnown RBP19.33■□□□□ 0.68
CHMP3-207ENST00000485465 LRRC8DQ7L1W4 858 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 GUF1Q8N442 669 aaKnown RBP19.33■□□□□ 0.68
CHMP3-207ENST00000485465 MLKLQ8NB16 471 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 TMEM40Q8WWA1 233 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 ACCSQ96QU6 501 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 FUCA2Q9BTY2 467 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 FZD8Q9H461 694 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 ANO10Q9NW15 660 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 MAPK8IP1Q9UQF2 711 aa19.33■□□□□ 0.68
CHMP3-207ENST00000485465 PPP1R3GB7ZBB8 358 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 KIF20AO95235 890 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 PRKCBP05771 671 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 IQCF3P0C7M6 154 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 CCDC192P0DO97 292 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 CD44P16070 742 aaKnown RBP19.32■□□□□ 0.68
CHMP3-207ENST00000485465 HOXD13P35453 343 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 KCNA1Q09470 495 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 STRN3Q13033 797 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 STX1AQ16623 288 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 DPCR1Q3MIW9 517 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 ADSSL1Q8N142 457 aa19.32■□□□□ 0.68
CHMP3-207ENST00000485465 PRMT7Q9NVM4 692 aaPredicted RBP19.32■□□□□ 0.68
CHMP3-207ENST00000485465 UMODL1Q5DID0 1318 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 KIAA0355O15063 1070 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 PPP1R2P41236 205 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 STIM1Q13586 685 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 PCBP1Q15365 356 aaKnown RBP eCLIP19.31■□□□□ 0.68
CHMP3-207ENST00000485465 FAM187BQ17R55 369 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 FBXO47Q5MNV8 452 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 PPP4R3CPQ6ZMV5 832 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 MAP4K3Q8IVH8 894 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 NELFCDQ8IXH7 590 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 HTATIP2Q9BUP3 242 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 PPP1R12CQ9BZL4 782 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 TMEM206Q9H813 350 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 NOC2LQ9Y3T9 749 aaKnown RBP19.31■□□□□ 0.68
CHMP3-207ENST00000485465 SQORQ9Y6N5 450 aa19.31■□□□□ 0.68
CHMP3-207ENST00000485465 TRIM43BA6NCK2 446 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 ACKR2O00590 384 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 FGFR4P22455 802 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 SFPQP23246 707 aaKnown RBP eCLIP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms