RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 RAD51AP2Q09MP3 1159 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 DHX8Q14562 1220 aaKnown RBP17.98■□□□□ 0.47
DDR1-246ENST00000485023 KARSQ15046 597 aaKnown RBP17.98■□□□□ 0.47
DDR1-246ENST00000485023 TMEM119Q4V9L6 283 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 CMTR2Q8IYT2 770 aaKnown RBP17.98■□□□□ 0.47
DDR1-246ENST00000485023 LPPQ93052 612 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 CALML4Q96GE6 196 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 CPB2Q96IY4 423 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 KIFC3Q9BVG8 833 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 NT5C3AQ9H0P0 336 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 CHST12Q9NRB3 414 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 TFIP11Q9UBB9 837 aaKnown RBP17.98■□□□□ 0.47
DDR1-246ENST00000485023 A0A0U1RQF3 1178 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 B4GALT5O43286 388 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 GTPBP6O43824 516 aaPredicted RBP17.97■□□□□ 0.47
DDR1-246ENST00000485023 LPXNO60711 386 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 F13A1P00488 732 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 ATF7P17544 494 aaPredicted RBP17.97■□□□□ 0.47
DDR1-246ENST00000485023 STK38Q15208 465 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 HYIQ5T013 277 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 SPOUT1Q5T280 376 aaKnown RBP17.97■□□□□ 0.47
DDR1-246ENST00000485023 USP49Q70CQ1 688 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 ABI1Q8IZP0 508 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 LRRC15Q8TF66 581 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 ELAC1Q9H777 363 aaKnown RBP17.97■□□□□ 0.47
DDR1-246ENST00000485023 FAM105AQ9NUU6 356 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 RNF19AQ9NV58 838 aa17.97■□□□□ 0.47
DDR1-246ENST00000485023 RNF216Q9NWF9 866 aaPredicted RBP17.97■□□□□ 0.47
DDR1-246ENST00000485023 HIP1RO75146 1068 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 LINC00271P0C7V0 271 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 PLA2G4BP0C869 781 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 PLCG1P19174 1290 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 CLLU1OSQ5K130 101 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 RINT1Q6NUQ1 792 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 FAM43BQ6ZT52 329 aaPredicted RBP17.96■□□□□ 0.47
DDR1-246ENST00000485023 CDR2LQ86X02 465 aaPredicted RBP17.96■□□□□ 0.47
DDR1-246ENST00000485023 ZBTB8OSQ8IWT0 167 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 DEPTORQ8TB45 409 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 HELQQ8TDG4 1101 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 EPSTI1Q96J88 318 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 ZNF396Q96N95 335 aaPredicted RBP17.96■□□□□ 0.47
DDR1-246ENST00000485023 SAMD11Q96NU1 681 aa17.96■□□□□ 0.47
DDR1-246ENST00000485023 NPHP3-ACAD11A0A0J9YXS1 232 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 MEIS3P2A8K0S8 358 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 HOXA11P31270 313 aaPredicted RBP17.95■□□□□ 0.46
DDR1-246ENST00000485023 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
DDR1-246ENST00000485023 GPM6BQ13491 265 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 SLC39A14Q15043 492 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 AMHR2Q16671 573 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 TMEM132AQ24JP5 1023 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 ZNF598Q86UK7 904 aaKnown RBP17.95■□□□□ 0.46
DDR1-246ENST00000485023 IFNLR1Q8IU57 520 aaPredicted RBP17.95■□□□□ 0.46
DDR1-246ENST00000485023 SYMPKQ92797 1274 aaKnown RBP17.95■□□□□ 0.46
DDR1-246ENST00000485023 KIFAP3Q92845 792 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 IFT74Q96LB3 600 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 INPP5FQ9Y2H2 1132 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 USP20Q9Y2K6 914 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 PCDHB2Q9Y5E7 798 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 SRPRBQ9Y5M8 271 aaKnown RBP17.95■□□□□ 0.46
DDR1-246ENST00000485023 MTCH2Q9Y6C9 303 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 MYH15Q9Y2K3 1946 aa17.95■□□□□ 0.46
DDR1-246ENST00000485023 CCDC169A6NNP5 214 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 SFI1A8K8P3 1242 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 HOXA2O43364 376 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 ARF4P18085 180 aaPredicted RBP17.94■□□□□ 0.46
DDR1-246ENST00000485023 BMPR1AP36894 532 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 NAMPTP43490 491 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 NASPP49321 788 aaPredicted RBP17.94■□□□□ 0.46
DDR1-246ENST00000485023 RAB27AP51159 221 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 SLC12A3P55017 1021 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 PEX3P56589 373 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 POU5F1BQ06416 359 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 NCBP1Q09161 790 aaKnown RBP17.94■□□□□ 0.46
DDR1-246ENST00000485023 PPP2R5AQ15172 486 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 UBXN11Q5T124 520 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 CDCA2Q69YH5 1023 aaPredicted RBP17.94■□□□□ 0.46
DDR1-246ENST00000485023 C1orf186Q6ZWK4 172 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 DAW1Q8N136 415 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 SYT2Q8N9I0 419 aaPredicted RBP17.94■□□□□ 0.46
DDR1-246ENST00000485023 CASD1Q96PB1 797 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 EIF2AQ9BY44 585 aaKnown RBP17.94■□□□□ 0.46
DDR1-246ENST00000485023 NFKBIZQ9BYH8 718 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 TMEM117Q9H0C3 514 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 TYW1Q9NV66 732 aaKnown RBP17.94■□□□□ 0.46
DDR1-246ENST00000485023 NLRC5Q86WI3 1866 aa17.94■□□□□ 0.46
DDR1-246ENST00000485023 KIAA1671Q9BY89 1806 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 TTLL13PA6NNM8 815 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 H3BNC9 293 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 EDN1P05305 212 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 PRKCBP05771 671 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 MAPK7Q13164 816 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 BECN1Q14457 450 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 MCM6Q14566 821 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 NOTUMQ6P988 496 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 GPBP1Q86WP2 473 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 LRRC43Q8N309 656 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 KRI1Q8N9T8 703 aaKnown RBP17.93■□□□□ 0.46
DDR1-246ENST00000485023 LINC00301Q8NCQ3 95 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 CLP1Q92989 425 aaKnown RBP17.93■□□□□ 0.46
DDR1-246ENST00000485023 DRC1Q96MC2 740 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms