RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 ALG13Q9NP73 1137 aaKnown RBP5.7□□□□□ -1.5
RC3H1-205ENST00000484867 A0A0A6YYJ9 748 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 KRTAP29-1A8MX34 341 aaPredicted RBP5.69□□□□□ -1.5
RC3H1-205ENST00000484867 HOXA3O43365 443 aaPredicted RBP5.69□□□□□ -1.5
RC3H1-205ENST00000484867 LPXNO60711 386 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 CFBP00751 764 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 TYRP1P17643 537 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 GNAT2P19087 354 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 HK1P19367 917 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 NPEPPSP55786 919 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 KRTAP10-9P60411 292 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 FAM214AQ32MH5 1076 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 TIGD2Q4W5G0 525 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 TTC38Q5R3I4 469 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 KRT40Q6A162 431 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 BRAPQ7Z569 592 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 CKAP2LQ8IYA6 745 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 JMYQ8N9B5 988 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 OR52N2Q8NGI0 321 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 PDCD2LQ9BRP1 358 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 SLC46A2Q9BY10 475 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 CPEB1Q9BZB8 566 aaKnown RBP5.69□□□□□ -1.5
RC3H1-205ENST00000484867 OSBPL6Q9BZF3 934 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 SERHL2Q9H4I8 314 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 TRIM39Q9HCM9 518 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 KDM2BQ8NHM5 1336 aa5.69□□□□□ -1.5
RC3H1-205ENST00000484867 UBA6A0AVT1 1052 aaPredicted RBP5.68□□□□□ -1.5
RC3H1-205ENST00000484867 ZNF185O15231 689 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 SCAF4O95104 1147 aaKnown RBP5.68□□□□□ -1.5
RC3H1-205ENST00000484867 LAG3P18627 525 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 CD38P28907 300 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 KIF11P52732 1056 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 BCAR1P56945 870 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 ARHGAP44Q17R89 818 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 STRIP1Q5VSL9 837 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 PPP1R14CQ8TAE6 165 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 ARL8AQ96BM9 186 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 ACSS2Q9NR19 701 aa5.68□□□□□ -1.5
RC3H1-205ENST00000484867 EPHA7Q15375 998 aa5.67□□□□□ -1.5
RC3H1-205ENST00000484867 PAPD7Q5XG87 772 aaKnown RBP5.67□□□□□ -1.5
RC3H1-205ENST00000484867 LILRA3Q8N6C8 439 aaPredicted RBP5.67□□□□□ -1.5
RC3H1-205ENST00000484867 FAM98AQ8NCA5 519 aaKnown RBP5.67□□□□□ -1.5
RC3H1-205ENST00000484867 MRPL4Q9BYD3 311 aaKnown RBP5.67□□□□□ -1.5
RC3H1-205ENST00000484867 SFMBT1Q9UHJ3 866 aa5.67□□□□□ -1.5
RC3H1-205ENST00000484867 EPN1Q9Y6I3 576 aaPredicted RBP5.67□□□□□ -1.5
RC3H1-205ENST00000484867 DAPK3O43293 454 aa5.66□□□□□ -1.5
RC3H1-205ENST00000484867 RECQL4O94761 1208 aa5.66□□□□□ -1.5
RC3H1-205ENST00000484867 RASA3Q14644 834 aa5.66□□□□□ -1.5
RC3H1-205ENST00000484867 ARHGEF19Q8IW93 802 aa5.66□□□□□ -1.5
RC3H1-205ENST00000484867 LINC00476Q8WZB0 136 aa5.66□□□□□ -1.5
RC3H1-205ENST00000484867 LSM14BQ9BX40 385 aaKnown RBP5.66□□□□□ -1.5
RC3H1-205ENST00000484867 CYP4F11Q9HBI6 524 aa5.66□□□□□ -1.5
RC3H1-205ENST00000484867 NCDNQ9UBB6 729 aa5.66□□□□□ -1.5
RC3H1-205ENST00000484867 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.66□□□□□ -1.5
RC3H1-205ENST00000484867 CHST2Q9Y4C5 530 aa5.66□□□□□ -1.5
RC3H1-205ENST00000484867 CCDC85CA6NKD9 419 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 STK10O94804 968 aaKnown RBP5.65□□□□□ -1.5
RC3H1-205ENST00000484867 CYP17A1P05093 508 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 GAAP10253 952 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 GYPEP15421 78 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 PTX3P26022 381 aaPredicted RBP5.65□□□□□ -1.5
RC3H1-205ENST00000484867 SERINC3Q13530 473 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 VPS72Q15906 364 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 PRR16Q569H4 304 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 IQSEC1Q6DN90 963 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 CCDC62Q6P9F0 684 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 NDC1Q9BTX1 674 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 WDR11Q9BZH6 1224 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 SIRPGQ9P1W8 387 aa5.65□□□□□ -1.5
RC3H1-205ENST00000484867 FAM221BA6H8Z2 402 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 GLRX3O76003 335 aaKnown RBP5.64□□□□□ -1.51
RC3H1-205ENST00000484867 KRT37O76014 449 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 PRAMEF9Q5VWM5 478 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 GPRIN1Q7Z2K8 1008 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 RD3Q7Z3Z2 195 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 NME9Q86XW9 330 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 CHST14Q8NCH0 376 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 TUBGCP5Q96RT8 1024 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 ING3Q9NXR8 418 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 ANKFY1Q9P2R3 1169 aa5.64□□□□□ -1.51
RC3H1-205ENST00000484867 M0R2C6 588 aa5.63□□□□□ -1.51
RC3H1-205ENST00000484867 DNAJC6O75061 913 aa5.63□□□□□ -1.51
RC3H1-205ENST00000484867 APOBEC3AP31941 199 aaPredicted RBP5.63□□□□□ -1.51
RC3H1-205ENST00000484867 FOXI1Q12951 378 aa5.63□□□□□ -1.51
RC3H1-205ENST00000484867 MRPL49Q13405 166 aaKnown RBP5.63□□□□□ -1.51
RC3H1-205ENST00000484867 ESRP1Q6NXG1 681 aaKnown RBP5.63□□□□□ -1.51
RC3H1-205ENST00000484867 FBXO42Q6P3S6 717 aa5.63□□□□□ -1.51
RC3H1-205ENST00000484867 UNQ6494/PRO21346Q6UXR6 183 aa5.63□□□□□ -1.51
RC3H1-205ENST00000484867 PIK3C3Q8NEB9 887 aa5.63□□□□□ -1.51
RC3H1-205ENST00000484867 RPGRQ92834 1020 aaKnown RBP5.63□□□□□ -1.51
RC3H1-205ENST00000484867 COQ10AQ96MF6 247 aa5.63□□□□□ -1.51
RC3H1-205ENST00000484867 CPPED1Q9BRF8 314 aaPredicted RBP5.63□□□□□ -1.51
RC3H1-205ENST00000484867 MTG2Q9H4K7 406 aa5.63□□□□□ -1.51
RC3H1-205ENST00000484867 CCDC163A0A0D9SF12 145 aa5.62□□□□□ -1.51
RC3H1-205ENST00000484867 OPHN1O60890 802 aa5.62□□□□□ -1.51
RC3H1-205ENST00000484867 SEC24CP53992 1094 aa5.62□□□□□ -1.51
RC3H1-205ENST00000484867 USP14P54578 494 aa5.62□□□□□ -1.51
RC3H1-205ENST00000484867 BEAN1Q3B7T3 259 aa5.62□□□□□ -1.51
RC3H1-205ENST00000484867 CREB3L3Q68CJ9 461 aa5.62□□□□□ -1.51
RC3H1-205ENST00000484867 ZCCHC8Q6NZY4 707 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms