RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 LMAN2LQ9H0V9 348 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 CWH43Q9H720 699 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 AGPAT5Q9NUQ2 364 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 DBR1Q9UK59 544 aaKnown RBP14.35□□□□□ -0.11
HDAC1-209ENST00000484305 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-209ENST00000484305 LAD1O00515 517 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 GLRA2P23416 452 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 CCT6AP40227 531 aaKnown RBP14.34□□□□□ -0.11
HDAC1-209ENST00000484305 PTENP60484 403 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 CAPSQ13938 189 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 LONRF3Q496Y0 759 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 RILPL1Q5EBL4 403 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 ABI1Q8IZP0 508 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 COLGALT1Q8NBJ5 622 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 HELQQ8TDG4 1101 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 SYMPKQ92797 1274 aaKnown RBP14.34□□□□□ -0.11
HDAC1-209ENST00000484305 LPPQ93052 612 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 POLR3FQ9H1D9 316 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-209ENST00000484305 NSUN3Q9H649 340 aaKnown RBP14.34□□□□□ -0.11
HDAC1-209ENST00000484305 GPRC5CQ9NQ84 441 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 FAM105AQ9NUU6 356 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 PCDHB12Q9Y5F1 795 aa14.34□□□□□ -0.11
HDAC1-209ENST00000484305 MEIS3P2A8K0S8 358 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 PP2D1A8MPX8 630 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 BMP1P13497 986 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 MUTP22033 750 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 PRPHP41219 470 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 ATP2C1P98194 919 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-209ENST00000484305 POU5F1BQ06416 359 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 TFDP1Q14186 410 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 AAK1Q2M2I8 961 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 HAUS3Q68CZ6 603 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 PADI6Q6TGC4 694 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-209ENST00000484305 POF1BQ8WVV4 589 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 UBE2ZQ9H832 354 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-209ENST00000484305 AAASQ9NRG9 546 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 TTC28Q96AY4 2481 aa14.33□□□□□ -0.12
HDAC1-209ENST00000484305 INO80B-WBP1J3KQ70 363 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 TSPAN1O60635 241 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 ZNF623O75123 536 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 FGF18O76093 207 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 ERLIN2O94905 339 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 SKIP12755 728 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 LAG3P18627 525 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 CDC25AP30304 524 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 IRS1P35568 1242 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 PBX3P40426 434 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 RAB27AP51159 221 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 MBTD1Q05BQ5 628 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 UBXN11Q5T124 520 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 DTHD1Q6ZMT9 781 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 THNSL1Q8IYQ7 743 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 LRRC43Q8N309 656 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 MCPH1Q8NEM0 835 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 SNX29Q8TEQ0 813 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 RAB34Q9BZG1 259 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 DDX19AQ9NUU7 478 aaKnown RBP14.32□□□□□ -0.12
HDAC1-209ENST00000484305 KIAA1024Q9UPX6 916 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 PCDHB2Q9Y5E7 798 aa14.32□□□□□ -0.12
HDAC1-209ENST00000484305 ARHGEF35A5YM69 484 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 KCNA5P22460 613 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 AMHR2Q16671 573 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 KCNT2Q6UVM3 1135 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 MRPL10Q7Z7H8 261 aaKnown RBP14.31□□□□□ -0.12
HDAC1-209ENST00000484305 ADAMTS19Q8TE59 1207 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 CPB2Q96IY4 423 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 MMTAG2Q9BU76 263 aaKnown RBP14.31□□□□□ -0.12
HDAC1-209ENST00000484305 NFKBIZQ9BYH8 718 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 BHMT2Q9H2M3 363 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 POLD4Q9HCU8 107 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 PCDHGC5Q9Y5F6 944 aa14.31□□□□□ -0.12
HDAC1-209ENST00000484305 LRRIQ4A6NIV6 560 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 E9PMD0 336 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 B4GALT5O43286 388 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 OFD1O75665 1012 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 CYP11B2P19099 503 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 GTF2F1P35269 517 aaKnown RBP eCLIP14.3□□□□□ -0.12
HDAC1-209ENST00000484305 HYAL1Q12794 435 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 COL19A1Q14993 1142 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 PCBP1Q15365 356 aaKnown RBP eCLIP14.3□□□□□ -0.12
HDAC1-209ENST00000484305 CSPP1Q1MSJ5 1256 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 KRT79Q5XKE5 535 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 AGMOQ6ZNB7 445 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 ADGRD2Q7Z7M1 963 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 SMG8Q8ND04 991 aaKnown RBP14.3□□□□□ -0.12
HDAC1-209ENST00000484305 BSNDQ8WZ55 320 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 PABPC5Q96DU9 382 aaKnown RBP14.3□□□□□ -0.12
HDAC1-209ENST00000484305 ZNF558Q96NG5 402 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 EIF2AQ9BY44 585 aaKnown RBP14.3□□□□□ -0.12
HDAC1-209ENST00000484305 STK24Q9Y6E0 443 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 NCOR1O75376 2440 aa14.3□□□□□ -0.12
HDAC1-209ENST00000484305 VPS37CA5D8V6 355 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-209ENST00000484305 VWA3AA6NCI4 1184 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 ARF4P18085 180 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-209ENST00000484305 AXLP30530 894 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 AFF1P51825 1210 aaKnown RBP14.29□□□□□ -0.12
HDAC1-209ENST00000484305 ERVFC1P60507 584 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 UBE3AQ05086 875 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 NOMO2Q5JPE7 1267 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms