RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 HOXA2O43364 376 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 MGEA5O60502 916 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 SCP2P22307 547 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 ME1P48163 572 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 RAB27AP51159 221 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 EFNA5P52803 228 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
RPP40-206ENST00000483546 MBTD1Q05BQ5 628 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 DMP1Q13316 513 aaPredicted RBP17.26■□□□□ 0.35
RPP40-206ENST00000483546 SPECC1Q5M775 1068 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 RRAGBQ5VZM2 374 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 PPP2R2DQ66LE6 453 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 USP49Q70CQ1 688 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 DEPTORQ8TB45 409 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 SP7Q8TDD2 431 aaPredicted RBP17.26■□□□□ 0.35
RPP40-206ENST00000483546 YME1L1Q96TA2 773 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 PYM1Q9BRP8 204 aaKnown RBP17.26■□□□□ 0.35
RPP40-206ENST00000483546 MINDY3Q9H8M7 445 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 PRMT7Q9NVM4 692 aaPredicted RBP17.26■□□□□ 0.35
RPP40-206ENST00000483546 TMEM161AQ9NX61 479 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 PIN4Q9Y237 131 aaKnown RBP17.26■□□□□ 0.35
RPP40-206ENST00000483546 PCDHB7Q9Y5E2 793 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 RALGAPA2Q2PPJ7 1873 aa17.26■□□□□ 0.35
RPP40-206ENST00000483546 A0A0U1RQF3 1178 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 HIP1RO75146 1068 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 CSDE1O75534 798 aaKnown RBP17.25■□□□□ 0.35
RPP40-206ENST00000483546 UPP2O95045 317 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 EOMESO95936 686 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 CA3P07451 260 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 FAM187BQ17R55 369 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 AXDND1Q5T1B0 1012 aaPredicted RBP17.25■□□□□ 0.35
RPP40-206ENST00000483546 SPATA32Q96LK8 384 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 NKX2-4Q9H2Z4 354 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 CUEDC2Q9H467 287 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 ZNF576Q9H609 170 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 LARSQ9P2J5 1176 aaKnown RBP17.25■□□□□ 0.35
RPP40-206ENST00000483546 PCDHA7Q9UN72 937 aa17.25■□□□□ 0.35
RPP40-206ENST00000483546 RBM19Q9Y4C8 960 aaKnown RBP17.25■□□□□ 0.35
RPP40-206ENST00000483546 FNDC1Q4ZHG4 1894 aaPredicted RBP17.24■□□□□ 0.35
RPP40-206ENST00000483546 DGKIO75912 1065 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
RPP40-206ENST00000483546 FGFR4P22455 802 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 STAT6P42226 847 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 MAPK7Q13164 816 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 MAPK6Q16659 721 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 TWF2Q6IBS0 349 aaKnown RBP17.24■□□□□ 0.35
RPP40-206ENST00000483546 FAM117BQ6P1L5 589 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 NOTUMQ6P988 496 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 TMCO2Q7Z6W1 182 aaPredicted RBP17.24■□□□□ 0.35
RPP40-206ENST00000483546 GPBP1Q86WP2 473 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 DAW1Q8N136 415 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 DEFB123Q8N688 67 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 LEO1Q8WVC0 666 aaPredicted RBP17.24■□□□□ 0.35
RPP40-206ENST00000483546 SPIRE2Q8WWL2 714 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 BSNDQ8WZ55 320 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 SAMD11Q96NU1 681 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 NTPCRQ9BSD7 190 aaKnown RBP17.24■□□□□ 0.35
RPP40-206ENST00000483546 SEMA6BQ9H3T3 888 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 RC3H2Q9HBD1 1191 aaKnown RBP17.24■□□□□ 0.35
RPP40-206ENST00000483546 FAM13BQ9NYF5 915 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 NLRC5Q86WI3 1866 aa17.24■□□□□ 0.35
RPP40-206ENST00000483546 ADGRA3Q8IWK6 1321 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 H0YCG3 227 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 TSPAN1O60635 241 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 ZNF623O75123 536 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 PLS3P13797 630 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 MYOGP15173 224 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 ABCD1P33897 745 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 SMTNP53814 917 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 MCM6Q14566 821 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 NAALADL2Q58DX5 795 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 ADALQ6DHV7 355 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 SHC4Q6S5L8 630 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 SV2BQ7L1I2 683 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 ECHDC2Q86YB7 292 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 CMTR2Q8IYT2 770 aaKnown RBP17.23■□□□□ 0.35
RPP40-206ENST00000483546 CNNM3Q8NE01 707 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 LRRC15Q8TF66 581 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 KCNN1Q92952 543 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 ZNF689Q96CS4 500 aaPredicted RBP17.23■□□□□ 0.35
RPP40-206ENST00000483546 LRRC27Q9C0I9 530 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 TTYH1Q9H313 450 aaPredicted RBP17.23■□□□□ 0.35
RPP40-206ENST00000483546 FZD8Q9H461 694 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 TMEM134Q9H6X4 195 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 MAGEF1Q9HAY2 307 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 RWDD3Q9Y3V2 267 aa17.23■□□□□ 0.35
RPP40-206ENST00000483546 CNTNAP2Q9UHC6 1331 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 MYO9BQ13459 2157 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 ACKR2O00590 384 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
RPP40-206ENST00000483546 HOXA11P31270 313 aaPredicted RBP17.22■□□□□ 0.35
RPP40-206ENST00000483546 NPTX2P47972 431 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 ZNF131P52739 623 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 PEX3P56589 373 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 TAP1Q03518 808 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 AMHR2Q16671 573 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 ARSHQ5FYA8 562 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 RESP18Q5W5W9 173 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 IQUBQ8NA54 791 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 SLC17A8Q8NDX2 589 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms