RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 KRT25Q7Z3Z0 450 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 ENDOVQ8N8Q3 282 aaKnown RBP12.72□□□□□ -0.37
VTI1A-205ENST00000483122 SLC35G2Q8TBE7 412 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 ALG3Q92685 438 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 IL17RBQ9NRM6 502 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 MTRF1LQ9UGC7 380 aaKnown RBP12.72□□□□□ -0.37
VTI1A-205ENST00000483122 ARMCX3Q9UH62 379 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-205ENST00000483122 RASAL2Q9UJF2 1139 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 GNA14O95837 355 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 EPHB2P29323 1055 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 NAPAP54920 295 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-205ENST00000483122 PPATQ06203 517 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 CCDC15Q0P6D6 951 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 USP4Q13107 963 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 GRM4Q14833 912 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 TNIP1Q15025 636 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 TTC27Q6P3X3 843 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 FAM47EQ6ZV65 393 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 LNX1Q8TBB1 728 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-205ENST00000483122 SH3RF3Q8TEJ3 882 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-205ENST00000483122 SNX29Q8TEQ0 813 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 ERP27Q96DN0 273 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 RBM41Q96IZ5 413 aaKnown RBP12.71□□□□□ -0.37
VTI1A-205ENST00000483122 PCDHA3Q9Y5H8 950 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 RPS6KL1Q9Y6S9 549 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 KIF13BQ9NQT8 1826 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-205ENST00000483122 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 LY75O60449 1722 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 ZNF831Q5JPB2 1677 aa12.71□□□□□ -0.37
VTI1A-205ENST00000483122 WTIPA6NIX2 430 aaPredicted RBP12.71□□□□□ -0.38
VTI1A-205ENST00000483122 ENTPD5O75356 428 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 BAG3O95817 575 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 GOLGA8HP0CJ92 632 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 RARGP13631 454 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 ABCB4P21439 1286 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 PON1P27169 355 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 ADCY1Q08828 1119 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 MUM1Q2TAK8 710 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 SEPT14Q6ZU15 432 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 INTS8Q75QN2 995 aaKnown RBP12.71□□□□□ -0.38
VTI1A-205ENST00000483122 APBB1IPQ7Z5R6 666 aaPredicted RBP12.71□□□□□ -0.38
VTI1A-205ENST00000483122 VSIG1Q86XK7 387 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 ZDHHC14Q8IZN3 488 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 AGGF1Q8N302 714 aaeCLIP12.71□□□□□ -0.38
VTI1A-205ENST00000483122 KIAA1683Q9H0B3 1180 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.71□□□□□ -0.38
VTI1A-205ENST00000483122 TMEM260Q9NX78 707 aa12.71□□□□□ -0.38
VTI1A-205ENST00000483122 COL1A1P02452 1464 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 SMCO2A6NFE2 343 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 SLC37A4O43826 429 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 PHF2O75151 1096 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 ACSL3O95573 720 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 RASA1P20936 1047 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 FOXN2P32314 431 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 STX2P32856 288 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 GYG1P46976 350 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 GNAQP50148 359 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 SESN3P58005 492 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 MTFR1Q15390 333 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 PPP2R5EQ16537 467 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 CALCRLQ16602 461 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 IRGCQ6NXR0 463 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 PRELID2Q8N945 189 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 RBBP8NLQ8NC74 664 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 OLIG1Q8TAK6 271 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 SLC7A6OSQ96CW6 309 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 ZNF333Q96JL9 665 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 FGD4Q96M96 766 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 MTMR9Q96QG7 549 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 NAP1L3Q99457 506 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 TBC1D10AQ9BXI6 508 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 UBE2OQ9C0C9 1292 aaKnown RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 TMX4Q9H1E5 349 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 CARD9Q9H257 536 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 DENND2DQ9H6A0 471 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 DCP1AQ9NPI6 582 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 NMRK1Q9NWW6 199 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 BIN2Q9UBW5 565 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 CHKBQ9Y259 395 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 NPHP3-ACAD11A0A0J9YXS1 232 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 VCAM1P19320 739 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 TAC1P20366 129 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 TFAP4Q01664 338 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 ACVR2BQ13705 512 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 TMEM119Q4V9L6 283 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 FAM81AQ8TBF8 368 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 ARHGEF26Q96DR7 871 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 ROPN1BQ9BZX4 212 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 VCXQ9H320 206 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 KCTD10Q9H3F6 313 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 CDC42EP4Q9H3Q1 356 aaKnown RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 ROPN1Q9HAT0 212 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-205ENST00000483122 ASAP1Q9ULH1 1129 aa12.7□□□□□ -0.38
VTI1A-205ENST00000483122 PITPNM2Q9BZ72 1349 aa12.69□□□□□ -0.38
VTI1A-205ENST00000483122 NVLO15381 856 aaKnown RBP12.69□□□□□ -0.38
VTI1A-205ENST00000483122 GFPT2O94808 682 aa12.69□□□□□ -0.38
VTI1A-205ENST00000483122 T-ENOLP0DO92 83 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms