RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 KIAA1841Q6NSI8 718 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 TIGD7Q6NT04 549 aaPredicted RBP4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 PCSK4Q6UW60 755 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 MRGPRGQ86SM5 289 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 CMTM4Q8IZR5 234 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 UIMC1Q96RL1 719 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 AGAP2Q99490 1192 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 TTPALQ9BTX7 342 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 C14orf93Q9H972 538 aaKnown RBP4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 ING3Q9NXR8 418 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 SYNPO2Q9UMS6 1093 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZKSCAN5Q9Y2L8 839 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 DMRT1Q9Y5R6 373 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZNF891A8MT65 544 aaPredicted RBP4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 ELL2O00472 640 aaPredicted RBP4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 KPNA6O60684 536 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 MFAP3LO75121 409 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 RFPL3O75679 317 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 GAAP10253 952 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 NPEPPSP55786 919 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 FAM214AQ32MH5 1076 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 RABL3Q5HYI8 236 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 MFSD5Q6N075 450 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 ULK2Q8IYT8 1036 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 RPUSD2Q8IZ73 545 aaKnown RBP4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 PIK3C3Q8NEB9 887 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 MDGA1Q8NFP4 955 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 CHTF18Q8WVB6 975 aa4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 MAGEC2Q9UBF1 373 aaPredicted RBP4.62□□□□□ -1.67
LAPTM4A-202ENST00000483117 FAM83GA6ND36 823 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 GOLGA6L6A8MZA4 724 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 RAMP2O60895 175 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 IPO13O94829 963 aaKnown RBP4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 PCDH8O95206 1070 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 F2P00734 622 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 CFBP00751 764 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 HK1P19367 917 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 TGM1P22735 817 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 NEK4P51957 841 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 FSTL1Q12841 308 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 HTR3DQ70Z44 454 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 MRGPREQ86SM8 312 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZZZ3Q8IYH5 903 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZNF276Q8N554 614 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 SLC25A43Q8WUT9 341 aaPredicted RBP4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 ORAI3Q9BRQ5 295 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 OSBPL6Q9BZF3 934 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 IFT57Q9NWB7 429 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 THG1LQ9NWX6 298 aaKnown RBP4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 TRPS1Q9UHF7 1281 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 CD2APQ9Y5K6 639 aa4.61□□□□□ -1.67
LAPTM4A-202ENST00000483117 LCHNA4D1U4 455 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 GRXCR1A8MXD5 290 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 FOXN1O15353 648 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 MAFGO15525 162 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 MTSS1O43312 755 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 TGM5O43548 720 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 GAS7O60861 476 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 FSBPO95073 299 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 GNAT2P19087 354 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 NR4A1P22736 598 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 CD40P25942 277 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 PTGS2P35354 604 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 PTTG1IPP53801 180 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 NANOS3P60323 173 aaKnown RBP4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 DSG1Q02413 1049 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 CD69Q07108 199 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 HNRNPA0Q13151 305 aaKnown RBP4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 MAN2A1Q16706 1144 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 CCDC144BQ3MJ40 725 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZBTB41Q5SVQ8 909 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 PPP1R14CQ8TAE6 165 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 ST8SIA2Q92186 375 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 HAS1Q92839 578 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZNF496Q96IT1 587 aaPredicted RBP4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 HIST1H2AHQ96KK5 128 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 PRRX2Q99811 253 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 HIST1H2AJQ99878 128 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 MTFR1LQ9H019 292 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 PIF1Q9H611 641 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 INTS7Q9NVH2 962 aaKnown RBP4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 MYPNQ86TC9 1320 aa4.6□□□□□ -1.67
LAPTM4A-202ENST00000483117 ALDH1A2O94788 518 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 LAIR1Q6GTX8 287 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 CNNM4Q6P4Q7 775 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 APBB1IPQ7Z5R6 666 aaPredicted RBP4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 NPM2Q86SE8 214 aaKnown RBP4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 CXorf67Q86X51 503 aaPredicted RBP4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 KIF18BQ86Y91 864 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 DNAJC10Q8IXB1 793 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 EFHBQ8N7U6 833 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZG16BQ96DA0 208 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 RNPC3Q96LT9 517 aaKnown RBP4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 MLST8Q9BVC4 326 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 ENKD1Q9H0I2 346 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 EPC1Q9H2F5 836 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 MS4A5Q9H3V2 200 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 MSRAQ9UJ68 235 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms