RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 HIP1RO75146 1068 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 DGKIO75912 1065 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 DDIT3P35638 169 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 KRT85P78386 507 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 TAP1Q03518 808 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 MBTD1Q05BQ5 628 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 RRAGBQ5VZM2 374 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 CCDC73Q6ZRK6 1079 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 USP49Q70CQ1 688 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 DEPTORQ8TB45 409 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 CCDC51Q96ER9 411 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 BLOC1S4Q9NUP1 217 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 MTMR10Q9NXD2 777 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 RCOR1Q9UKL0 485 aa18.35■□□□□ 0.53
HMGN1-214ENST00000482733 PHLPP2Q6ZVD8 1323 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 LCHNA4D1U4 455 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 HOXA2O43364 376 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 EOMESO95936 686 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 ANP32AP39687 249 aaKnown RBP18.34■□□□□ 0.53
HMGN1-214ENST00000482733 ME1P48163 572 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 RAB27AP51159 221 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 EFNA5P52803 228 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 DMP1Q13316 513 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-214ENST00000482733 TWF2Q6IBS0 349 aaKnown RBP18.34■□□□□ 0.53
HMGN1-214ENST00000482733 BSNDQ8WZ55 320 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 LARP4BQ92615 738 aaKnown RBP18.34■□□□□ 0.53
HMGN1-214ENST00000482733 ZNF689Q96CS4 500 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-214ENST00000482733 PRIMPOLQ96LW4 560 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 FAM161BQ96MY7 647 aa18.34■□□□□ 0.53
HMGN1-214ENST00000482733 RC3H2Q9HBD1 1191 aaKnown RBP18.34■□□□□ 0.53
HMGN1-214ENST00000482733 PRMT7Q9NVM4 692 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-214ENST00000482733 ADGRA3Q8IWK6 1321 aa18.33■□□□□ 0.53
HMGN1-214ENST00000482733 LINC01553A4QN01 128 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 TSPAN1O60635 241 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 FAM187BQ17R55 369 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 NOTUMQ6P988 496 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 GPBP1Q86WP2 473 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 ECHDC2Q86YB7 292 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 CMTR2Q8IYT2 770 aaKnown RBP18.33■□□□□ 0.52
HMGN1-214ENST00000482733 FIBCD1Q8N539 461 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 RSPH1Q8WYR4 309 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 SAMD11Q96NU1 681 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 TGS1Q96RS0 853 aaKnown RBP18.33■□□□□ 0.52
HMGN1-214ENST00000482733 ODF2LQ9ULJ1 636 aa18.33■□□□□ 0.52
HMGN1-214ENST00000482733 COL4A6Q14031 1691 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 ZNF623O75123 536 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 NCLP19338 710 aaKnown RBP18.32■□□□□ 0.52
HMGN1-214ENST00000482733 IBSPP21815 317 aaPredicted RBP18.32■□□□□ 0.52
HMGN1-214ENST00000482733 HOXA11P31270 313 aaPredicted RBP18.32■□□□□ 0.52
HMGN1-214ENST00000482733 PEX3P56589 373 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 ERVK-21P61565 698 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 MAPK7Q13164 816 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 BTG3Q14201 252 aaPredicted RBP18.32■□□□□ 0.52
HMGN1-214ENST00000482733 MCM6Q14566 821 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 GRIN2CQ14957 1233 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 MAPK6Q16659 721 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 AXDND1Q5T1B0 1012 aaPredicted RBP18.32■□□□□ 0.52
HMGN1-214ENST00000482733 DAW1Q8N136 415 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 SCAND2PQ9GZW5 306 aaPredicted RBP18.32■□□□□ 0.52
HMGN1-214ENST00000482733 FZD8Q9H461 694 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 FAM105AQ9NUU6 356 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 PCDHA7Q9UN72 937 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 RWDD3Q9Y3V2 267 aa18.32■□□□□ 0.52
HMGN1-214ENST00000482733 RBM19Q9Y4C8 960 aaKnown RBP18.32■□□□□ 0.52
HMGN1-214ENST00000482733 CCDC169A6NNP5 214 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 KRT18P05783 430 aaKnown RBP18.31■□□□□ 0.52
HMGN1-214ENST00000482733 PLS3P13797 630 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 STAT6P42226 847 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 NPTX2P47972 431 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 SMTNP53814 917 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 DHX8Q14562 1220 aaKnown RBP18.31■□□□□ 0.52
HMGN1-214ENST00000482733 AMHR2Q16671 573 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 ARSHQ5FYA8 562 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 SV2BQ7L1I2 683 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 ZNF598Q86UK7 904 aaKnown RBP18.31■□□□□ 0.52
HMGN1-214ENST00000482733 CNNM3Q8NE01 707 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 LRRC15Q8TF66 581 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 SPIRE2Q8WWL2 714 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 PGBD4Q96DM1 585 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 SPATA32Q96LK8 384 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 GUCD1Q96NT3 240 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 CDX2Q99626 313 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-214ENST00000482733 POLD4Q9HCU8 107 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 KMT5AQ9NQR1 393 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 FAM13BQ9NYF5 915 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 LARSQ9P2J5 1176 aaKnown RBP18.31■□□□□ 0.52
HMGN1-214ENST00000482733 LOXHD1Q8IVV2 1947 aa18.31■□□□□ 0.52
HMGN1-214ENST00000482733 TTC3P53804 2025 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 ACKR2O00590 384 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 ARHGEF15O94989 841 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 PRKCBP05771 671 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 SCP2P22307 547 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 RAD51AP2Q09MP3 1159 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 NAALADL2Q58DX5 795 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 SHC4Q6S5L8 630 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 ABI1Q8IZP0 508 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 LEO1Q8WVC0 666 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-214ENST00000482733 PYM1Q9BRP8 204 aaKnown RBP18.3■□□□□ 0.52
HMGN1-214ENST00000482733 NTPCRQ9BSD7 190 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms