RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 Q7L0L9 218 aa23.13■■□□□ 1.29
SEC13-217ENST00000482647 DEPTORQ8TB45 409 aa23.13■■□□□ 1.29
SEC13-217ENST00000482647 BSNDQ8WZ55 320 aa23.13■■□□□ 1.29
SEC13-217ENST00000482647 TTYH1Q9H313 450 aaPredicted RBP23.13■■□□□ 1.29
SEC13-217ENST00000482647 C17orf75Q9HAS0 396 aa23.13■■□□□ 1.29
SEC13-217ENST00000482647 STK17AQ9UEE5 414 aa23.13■■□□□ 1.29
SEC13-217ENST00000482647 KCNG1Q9UIX4 513 aa23.13■■□□□ 1.29
SEC13-217ENST00000482647 ARID2Q68CP9 1835 aa23.12■■□□□ 1.29
SEC13-217ENST00000482647 IBSPP21815 317 aaPredicted RBP23.12■■□□□ 1.29
SEC13-217ENST00000482647 MCM6Q14566 821 aa23.12■■□□□ 1.29
SEC13-217ENST00000482647 AXDND1Q5T1B0 1012 aaPredicted RBP23.12■■□□□ 1.29
SEC13-217ENST00000482647 CDCA2Q69YH5 1023 aaPredicted RBP23.12■■□□□ 1.29
SEC13-217ENST00000482647 TWF2Q6IBS0 349 aaKnown RBP23.12■■□□□ 1.29
SEC13-217ENST00000482647 GPBP1Q86WP2 473 aa23.12■■□□□ 1.29
SEC13-217ENST00000482647 LARP4BQ92615 738 aaKnown RBP23.12■■□□□ 1.29
SEC13-217ENST00000482647 TRAIPQ9BWF2 469 aa23.12■■□□□ 1.29
SEC13-217ENST00000482647 PANK2Q9BZ23 570 aa23.12■■□□□ 1.29
SEC13-217ENST00000482647 ELAC1Q9H777 363 aaKnown RBP23.12■■□□□ 1.29
SEC13-217ENST00000482647 TMEM161AQ9NX61 479 aa23.12■■□□□ 1.29
SEC13-217ENST00000482647 PCDHA7Q9UN72 937 aa23.12■■□□□ 1.29
SEC13-217ENST00000482647 MICAL3Q7RTP6 2002 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 A0A0U1RQF3 1178 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 LCHNA4D1U4 455 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 DGKIO75912 1065 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 SKIP12755 728 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 AXLP30530 894 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 EFNA5P52803 228 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 RAD51AP2Q09MP3 1159 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 ARSHQ5FYA8 562 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 DAW1Q8N136 415 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 LRRC15Q8TF66 581 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 SPATA32Q96LK8 384 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 FAM161BQ96MY7 647 aa23.11■■□□□ 1.29
SEC13-217ENST00000482647 SCAND2PQ9GZW5 306 aaPredicted RBP23.11■■□□□ 1.29
SEC13-217ENST00000482647 CCDC169A6NNP5 214 aa23.1■■□□□ 1.29
SEC13-217ENST00000482647 TSPAN1O60635 241 aa23.1■■□□□ 1.29
SEC13-217ENST00000482647 KRT18P05783 430 aaKnown RBP23.1■■□□□ 1.29
SEC13-217ENST00000482647 HOXA11P31270 313 aaPredicted RBP23.1■■□□□ 1.29
SEC13-217ENST00000482647 STAT6P42226 847 aa23.1■■□□□ 1.29
SEC13-217ENST00000482647 PEX3P56589 373 aa23.1■■□□□ 1.29
SEC13-217ENST00000482647 TAP1Q03518 808 aa23.1■■□□□ 1.29
SEC13-217ENST00000482647 DMP1Q13316 513 aaPredicted RBP23.1■■□□□ 1.29
SEC13-217ENST00000482647 SHC4Q6S5L8 630 aa23.1■■□□□ 1.29
SEC13-217ENST00000482647 ECHDC2Q86YB7 292 aa23.1■■□□□ 1.29
SEC13-217ENST00000482647 SP7Q8TDD2 431 aaPredicted RBP23.1■■□□□ 1.29
SEC13-217ENST00000482647 LEO1Q8WVC0 666 aaPredicted RBP23.1■■□□□ 1.29
SEC13-217ENST00000482647 PRMT7Q9NVM4 692 aaPredicted RBP23.1■■□□□ 1.29
SEC13-217ENST00000482647 NPHP3-ACAD11A0A0J9YXS1 232 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 SFI1A8K8P3 1242 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 EOMESO95936 686 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 NPTX2P47972 431 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 MAPK7Q13164 816 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 MAPK6Q16659 721 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 SV2BQ7L1I2 683 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 ZNF689Q96CS4 500 aaPredicted RBP23.09■■□□□ 1.29
SEC13-217ENST00000482647 CCDC51Q96ER9 411 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 PRIMPOLQ96LW4 560 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 FZD8Q9H461 694 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 FAM13BQ9NYF5 915 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 ODF2LQ9ULJ1 636 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 LOXHD1Q8IVV2 1947 aa23.09■■□□□ 1.29
SEC13-217ENST00000482647 LINC01553A4QN01 128 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 HOXA2O43364 376 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 PLS3P13797 630 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 RAB27AP51159 221 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 BTG3Q14201 252 aaPredicted RBP23.08■■□□□ 1.29
SEC13-217ENST00000482647 AMHR2Q16671 573 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 FAM187BQ17R55 369 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 NAALADL2Q58DX5 795 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 NOTUMQ6P988 496 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 PPP4R3CPQ6ZMV5 832 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 PDILTQ8N807 584 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 RNF169Q8NCN4 708 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 CHAMP1Q96JM3 812 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 NTPCRQ9BSD7 190 aaKnown RBP23.08■■□□□ 1.29
SEC13-217ENST00000482647 KIFC3Q9BVG8 833 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 KMT5AQ9NQR1 393 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 FAM105AQ9NUU6 356 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 MTMR10Q9NXD2 777 aa23.08■■□□□ 1.29
SEC13-217ENST00000482647 RBM19Q9Y4C8 960 aaKnown RBP23.08■■□□□ 1.29
SEC13-217ENST00000482647 TTC3P53804 2025 aa23.08■■□□□ 1.28
SEC13-217ENST00000482647 A0A087X0B3 334 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 ZNF623O75123 536 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 SMTNP53814 917 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 GRIN2CQ14957 1233 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 CMTR2Q8IYT2 770 aaKnown RBP23.07■■□□□ 1.28
SEC13-217ENST00000482647 FIBCD1Q8N539 461 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 IQUBQ8NA54 791 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 SPIRE2Q8WWL2 714 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 TGS1Q96RS0 853 aaKnown RBP23.07■■□□□ 1.28
SEC13-217ENST00000482647 REEP2Q9BRK0 252 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 RC3H2Q9HBD1 1191 aaKnown RBP23.07■■□□□ 1.28
SEC13-217ENST00000482647 LARSQ9P2J5 1176 aaKnown RBP23.07■■□□□ 1.28
SEC13-217ENST00000482647 CIZ1Q9ULV3 898 aaPredicted RBP23.07■■□□□ 1.28
SEC13-217ENST00000482647 CHD7Q9P2D1 2997 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 PHLPP2Q6ZVD8 1323 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 ADGRA3Q8IWK6 1321 aa23.07■■□□□ 1.28
SEC13-217ENST00000482647 K7ERI5 159 aa23.06■■□□□ 1.28
SEC13-217ENST00000482647 ACKR2O00590 384 aa23.06■■□□□ 1.28
SEC13-217ENST00000482647 ARHGEF15O94989 841 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms