RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CA12O43570 354 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 DDX58O95786 925 aaKnown RBP7.93□□□□□ -1.14
CLK1-212ENST00000482590 HSP90AA1P07900 732 aaKnown RBP7.93□□□□□ -1.14
CLK1-212ENST00000482590 PFKLP17858 780 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 MAP2K2P36507 400 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 GPSM2P81274 684 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 CST9Q5W186 159 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 HLA-DQA1Q5Y7H0 255 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 NAT16Q8N8M0 369 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 DPF2Q92785 391 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 ABHD8Q96I13 439 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 MYD88Q99836 296 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 NT5C1AQ9BXI3 368 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 CASS4Q9NQ75 786 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 LAMB1P07942 1786 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 A0A1W2PQ27 194 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 A0A1W2PQ64 194 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 A0A1W2PQC6 194 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 A0A1W2PQD8 194 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 SHTN1A0MZ66 631 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 H0Y8X5 98 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 PRICKLE3O43900 615 aaPredicted RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 UFL1O94874 794 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 MYL1P05976 194 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 DBHP09172 617 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 RPS12P25398 132 aaKnown RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 KCNC1P48547 511 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 CDKN1CP49918 316 aaPredicted RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 EPHB1P54762 984 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 HUNKP57058 714 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 EFEMP1Q12805 493 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 CCDC152Q4G0S7 254 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 TBC1D10BQ4KMP7 808 aaPredicted RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 VWA3BQ502W6 1294 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 SYCP2LQ5T4T6 812 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 INTS3Q68E01 1043 aaKnown RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 PAQR3Q6TCH7 311 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 FAM43BQ6ZT52 329 aaPredicted RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 CCDC144CPQ8IYA2 1237 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 ZBTB38Q8NAP3 1195 aaPredicted RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 TBC1D16Q8TBP0 767 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 PPM1EQ8WY54 764 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 DCPSQ96C86 337 aaKnown RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 DHRS1Q96LJ7 313 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 SRRTQ9BXP5 876 aaKnown RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 CCDC113Q9H0I3 377 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 PHAXQ9H814 394 aaKnown RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 PRKRIP1Q9H875 184 aaPredicted RBP7.92□□□□□ -1.14
CLK1-212ENST00000482590 PGAP2Q9UHJ9 254 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 STRIP2Q9ULQ0 834 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 ZNF609O15014 1411 aa7.92□□□□□ -1.14
CLK1-212ENST00000482590 CFAP69A5D8W1 941 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 ELL2O00472 640 aaPredicted RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 APAF1O14727 1248 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 SRGAP3O43295 1099 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 PDE8AO60658 829 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 CYBBP04839 570 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 PCCAP05165 728 aaPredicted RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 MAN1A1P33908 653 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 NASPP49321 788 aaPredicted RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 RPS8P62241 208 aaKnown RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 NOGQ13253 232 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 RTP5Q14D33 572 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 BRD3Q15059 726 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 PPP2R5AQ15172 486 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 TARBP2Q15633 366 aaKnown RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 CWF19L1Q69YN2 538 aaKnown RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 JAMLQ86YT9 394 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 CCDC191Q8NCU4 936 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 HNRNPLLQ8WVV9 542 aaKnown RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 DNAJC7Q99615 494 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 ARPC5LQ9BPX5 153 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 BDH2Q9BUT1 245 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 GBA2Q9HCG7 927 aaPredicted RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 CWC25Q9NXE8 425 aaPredicted RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 MAP3K20Q9NYL2 800 aaKnown RBP7.91□□□□□ -1.14
CLK1-212ENST00000482590 POLLQ9UGP5 575 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 ATP8A1Q9Y2Q0 1164 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 MSRB2Q9Y3D2 182 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 XDHP47989 1333 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 RTL9Q8NET4 1388 aa7.91□□□□□ -1.14
CLK1-212ENST00000482590 PDE4DIPQ5VU43 2346 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 CCDC85CA6NKD9 419 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 ADM5C9JUS6 153 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 FGF10O15520 208 aaPredicted RBP7.9□□□□□ -1.14
CLK1-212ENST00000482590 PLA2G1BP04054 148 aaKnown RBP7.9□□□□□ -1.14
CLK1-212ENST00000482590 ZNF853P0CG23 659 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 ATF2P15336 505 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 PMS1P54277 932 aaKnown RBP7.9□□□□□ -1.14
CLK1-212ENST00000482590 PLP2Q04941 152 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 NEXNQ0ZGT2 675 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 CCDC30Q5VVM6 783 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 TDRD10Q5VZ19 366 aaKnown RBP7.9□□□□□ -1.14
CLK1-212ENST00000482590 PPFIBP1Q86W92 1011 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 ANKRD18AQ8IVF6 992 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 ADGRG2Q8IZP9 1017 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 C2orf69Q8N8R5 385 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 CDC5LQ99459 802 aaKnown RBP7.9□□□□□ -1.14
CLK1-212ENST00000482590 STK31Q9BXU1 1019 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 CHST12Q9NRB3 414 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms