RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 HCN4Q9Y3Q4 1203 aa15.03■□□□□ -0
CTDSP1-208ENST00000482272 COL4A3BPQ9Y5P4 624 aa15.03■□□□□ -0
CTDSP1-208ENST00000482272 PRR33A8MZF0 331 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 GAS2O43903 313 aaKnown RBP15.02■□□□□ -0
CTDSP1-208ENST00000482272 ZNF623O75123 536 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 SRGAP2CP0DJJ0 459 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 CTTNQ14247 550 aaKnown RBP15.02■□□□□ -0
CTDSP1-208ENST00000482272 PLPP4Q5VZY2 271 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 TMC7Q7Z402 723 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 SRGAP1Q7Z6B7 1085 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 TPH2Q8IWU9 490 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 PRPF31Q8WWY3 499 aaKnown RBP15.02■□□□□ -0
CTDSP1-208ENST00000482272 PSPC1Q8WXF1 523 aaKnown RBP15.02■□□□□ -0
CTDSP1-208ENST00000482272 TMEM143Q96AN5 459 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 IFT122Q9HBG6 1241 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 C11orf16Q9NQ32 467 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 FAM105AQ9NUU6 356 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 RGL1Q9NZL6 768 aa15.02■□□□□ -0
CTDSP1-208ENST00000482272 BARX2Q9UMQ3 279 aaPredicted RBP15.02■□□□□ -0
CTDSP1-208ENST00000482272 FAM86C2PA6NEL3 165 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 BTBD18B2RXH4 712 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 SLITRK3O94933 977 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 GLP2RO95838 553 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 PBX3P40426 434 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 RBM10P98175 930 aaKnown RBP15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 CYP4A11Q02928 519 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 CALCRLQ16602 461 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 C8orf34Q49A92 452 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 TMEM184AQ6ZMB5 413 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 DIS3L2Q8IYB7 885 aaKnown RBP15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 SLC39A11Q8N1S5 342 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 SMRP1Q8NCR6 262 aa15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 TTC12Q9H892 705 aaPredicted RBP15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 BMP2KQ9NSY1 1161 aaPredicted RBP15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 ARIH1Q9Y4X5 557 aaPredicted RBP15.01□□□□□ -0.01
CTDSP1-208ENST00000482272 MEIS3P2A8K0S8 358 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 TXKP42681 527 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 BCAR1P56945 870 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 NCBP1Q09161 790 aaKnown RBP15□□□□□ -0.01
CTDSP1-208ENST00000482272 LAMTOR4Q0VGL1 99 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 SMC1AQ14683 1233 aaKnown RBP15□□□□□ -0.01
CTDSP1-208ENST00000482272 EMC2Q15006 297 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 SAFBQ15424 915 aaKnown RBP eCLIP15□□□□□ -0.01
CTDSP1-208ENST00000482272 GLB1LQ6UWU2 654 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 FERMT3Q86UX7 667 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 LPPQ93052 612 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 TMEM169Q96HH4 297 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 MTRQ99707 1265 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 HSD17B14Q9BPX1 270 aa15□□□□□ -0.01
CTDSP1-208ENST00000482272 EIF2AK1Q9BQI3 630 aaKnown RBP15□□□□□ -0.01
CTDSP1-208ENST00000482272 HIDE1A8MVS5 230 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 NT5C1B-RDH14C9J2C7 533 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 NEMFO60524 1076 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 OFD1O75665 1012 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 LYPLA2O95372 231 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 TECP42680 631 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 RNASELQ05823 741 aaKnown RBP14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 MXD4Q14582 209 aaPredicted RBP14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 PCBP1Q15365 356 aaKnown RBP eCLIP14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 LONRF3Q496Y0 759 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 NOMO2Q5JPE7 1267 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 RNF135Q8IUD6 432 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 MRPL43Q8N983 215 aaKnown RBP14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 TMEM87AQ8NBN3 555 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 RNF149Q8NC42 400 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 CNNM3Q8NE01 707 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 VN1R2Q8NFZ6 395 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 FAM122AQ96E09 287 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 CCDC43Q96MW1 224 aaKnown RBP14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 ANKEF1Q9NU02 776 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 AGPAT5Q9NUQ2 364 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 LIMCH1Q9UPQ0 1083 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 INPP5FQ9Y2H2 1132 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 USP15Q9Y4E8 981 aaPredicted RBP14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 PCDHB2Q9Y5E7 798 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 NCOR1O75376 2440 aa14.99□□□□□ -0.01
CTDSP1-208ENST00000482272 ZC3H11AO75152 810 aaKnown RBP eCLIP14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 DGAT1O75907 488 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 ERLIN2O94905 339 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 CXCL14O95715 111 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 XRCC6P12956 609 aaKnown RBP eCLIP14.98□□□□□ -0.018e-6■□□□□ 10.2
CTDSP1-208ENST00000482272 HOXB8P17481 243 aaPredicted RBP14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 CA8P35219 290 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 GUCY1B3Q02153 619 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 KCNC3Q14003 757 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 GIT2Q14161 759 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 TFDP1Q14186 410 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 ANKRD54Q6NXT1 300 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 MRPL10Q7Z7H8 261 aaKnown RBP14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 URGCPQ8TCY9 931 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 CASP10Q92851 521 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 FAM193BQ96PV7 902 aaPredicted RBP14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 PHF7Q9BWX1 381 aaPredicted RBP14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 TMEM60Q9H2L4 133 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 NRDE2Q9H7Z3 1164 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 MINDY3Q9H8M7 445 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 TBC1D13Q9NVG8 400 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 KANSL3Q9P2N6 904 aa14.98□□□□□ -0.01
CTDSP1-208ENST00000482272 A0A087WWV3 80 aa14.97□□□□□ -0.01
CTDSP1-208ENST00000482272 C2orf71A6NGG8 1288 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms