RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 NCBP1Q09161 790 aaKnown RBP13.2□□□□□ -0.3
HMGN1-213ENST00000482192 CAPSQ13938 189 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 CLLU1OSQ5K130 101 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 IFNLR1Q8IU57 520 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-213ENST00000482192 ASAP3Q8TDY4 903 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 SNX29Q8TEQ0 813 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 NFKBIZQ9BYH8 718 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-213ENST00000482192 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 INO80B-WBP1J3KQ70 363 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 TSPAN1O60635 241 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 ZNF623O75123 536 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 HOXA11P31270 313 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-213ENST00000482192 UBE3AQ05086 875 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 MBTD1Q05BQ5 628 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 TCEAL5Q5H9L2 206 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 KRT79Q5XKE5 535 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 GLB1LQ6UWU2 654 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 LRRC55Q6ZSA7 311 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 MAEAQ7L5Y9 396 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 BRAPQ7Z569 592 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 COLGALT1Q8NBJ5 622 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 SPPL3Q8TCT6 385 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 CWH43Q9H720 699 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 UBE2ZQ9H832 354 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-213ENST00000482192 GPRC5CQ9NQ84 441 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 HCSTQ9UBK5 93 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 KIAA1024Q9UPX6 916 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 PCDHB2Q9Y5E7 798 aa13.19□□□□□ -0.3
HMGN1-213ENST00000482192 PRRC2BQ5JSZ5 2229 aaKnown RBP13.19□□□□□ -0.3
HMGN1-213ENST00000482192 KIAA1671Q9BY89 1806 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-213ENST00000482192 NCK2O43639 380 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 FGF18O76093 207 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 CYP11B2P19099 503 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 DNAJB1P25685 340 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 AXLP30530 894 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 PPM1AP35813 382 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 KCNQ1P51787 676 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 CAMK1Q14012 370 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 IL17AQ16552 155 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 ARL6IP4Q66PJ3 421 aaKnown RBP13.18□□□□□ -0.3
HMGN1-213ENST00000482192 NOTUMQ6P988 496 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 ADAMTS19Q8TE59 1207 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 POF1BQ8WVV4 589 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 PPP2R3CQ969Q6 453 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 CCDC51Q96ER9 411 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
HMGN1-213ENST00000482192 ZNF558Q96NG5 402 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 BHMT2Q9H2M3 363 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 DDX19AQ9NUU7 478 aaKnown RBP13.18□□□□□ -0.3
HMGN1-213ENST00000482192 EYSQ5T1H1 3165 aa13.18□□□□□ -0.3
HMGN1-213ENST00000482192 FNDC1Q4ZHG4 1894 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-213ENST00000482192 VPS37CA5D8V6 355 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-213ENST00000482192 LRRIQ4A6NIV6 560 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 PP2D1A8MPX8 630 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 K7ELQ4 463 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-213ENST00000482192 CSPG5O95196 566 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 BMP1P13497 986 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 PLCB3Q01970 1234 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 ECM1Q16610 540 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 UBXN11Q5T124 520 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 KCNT2Q6UVM3 1135 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 MRPL10Q7Z7H8 261 aaKnown RBP13.17□□□□□ -0.3
HMGN1-213ENST00000482192 CNNM3Q8NE01 707 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 LPPQ93052 612 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
HMGN1-213ENST00000482192 DNM3Q9UQ16 869 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 LZTS1Q9Y250 596 aa13.17□□□□□ -0.3
HMGN1-213ENST00000482192 CNTNAP2Q9UHC6 1331 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 CARNS1A5YM72 827 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 VWA3AA6NCI4 1184 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 MEIS3P2A8K0S8 358 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 EYA4O95677 639 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 BMP15O95972 392 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
HMGN1-213ENST00000482192 KCNA5P22460 613 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 ALDH7A1P49419 539 aaKnown RBP13.16□□□□□ -0.3
HMGN1-213ENST00000482192 KRT17Q04695 432 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 PPP2R5AQ15172 486 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 AMHR2Q16671 573 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 LEXMQ3ZCV2 418 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 NOMO2Q5JPE7 1267 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-213ENST00000482192 PDE12Q6L8Q7 609 aaKnown RBP13.16□□□□□ -0.3
HMGN1-213ENST00000482192 ZBTB8OSQ8IWT0 167 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 KCTD17Q8N5Z5 321 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 KIFAP3Q92845 792 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 C2orf40Q9H1Z8 148 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 RSAD1Q9HA92 442 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 TLR9Q9NR96 1032 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 TBC1D13Q9NVG8 400 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms