RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 CDCA3Q99618 268 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 TLR9Q9NR96 1032 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 SH2B1Q9NRF2 756 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 SPG21Q9NZD8 308 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 FAM50BQ9Y247 325 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 PCDHGC5Q9Y5F6 944 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 INPPL1O15357 1258 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 MARCH6O60337 910 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 GPR37L1O60883 481 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 OFD1O75665 1012 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 PPM1AP35813 382 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 NRIP1P48552 1158 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 RARRES1P49788 294 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 RAB27AP51159 221 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 POLGP54098 1239 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 PTENP60484 403 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 CYP4A11Q02928 519 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 TRIM29Q14134 588 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 MXD4Q14582 209 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 EMC2Q15006 297 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 XKR9Q5GH70 373 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 C4orf32Q8N8J7 132 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 MRPL43Q8N983 215 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 SMRP1Q8NCR6 262 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 VN1R2Q8NFZ6 395 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 NLRP4Q96MN2 994 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 ZNF558Q96NG5 402 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 SCLT1Q96NL6 688 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 MRPL9Q9BYD2 267 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 NFKBIZQ9BYH8 718 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 TLE6Q9H808 572 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 NGRNQ9NPE2 291 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 FAM105AQ9NUU6 356 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 PUF60Q9UHX1 559 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 CD207Q9UJ71 328 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
TMEM39A-207ENST00000482162 FSD2A1L4K1 749 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 CARNS1A5YM72 827 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 MEIS3P2A8K0S8 358 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 DGAT1O75907 488 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 SRGAP2CP0DJJ0 459 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 U2AF2P26368 475 aaKnown RBP eCLIP10.84□□□□□ -0.671e-9■■■■□ 21.9
TMEM39A-207ENST00000482162 TXKP42681 527 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 TRAPPC10P48553 1259 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 HMGN5P82970 282 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 SAFBQ15424 915 aaKnown RBP eCLIP10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 AMHR2Q16671 573 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 AGMOQ6ZNB7 445 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 CATSPER4Q7RTX7 472 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 CATSPER3Q86XQ3 398 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 CCDC83Q8IWF9 413 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 THNSL1Q8IYQ7 743 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 ABI1Q8IZP0 508 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 RNF149Q8NC42 400 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 HELQQ8TDG4 1101 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 SUSD6Q92537 303 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 C8orf76Q96K31 380 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 POLR3CQ9BUI4 534 aaPredicted RBP10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 S1PR5Q9H228 398 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 IGFLR1Q9H665 355 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 TUFT1Q9NNX1 390 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 TBC1D13Q9NVG8 400 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 DBR1Q9UK59 544 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 PCDHB2Q9Y5E7 798 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 IRAK3Q9Y616 596 aa10.84□□□□□ -0.67
TMEM39A-207ENST00000482162 GALTP07902 379 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 NCLP19338 710 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 IBSPP21815 317 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 AXLP30530 894 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 ALDH7A1P49419 539 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 AFF1P51825 1210 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 BCAR1P56945 870 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 GUCY1B3Q02153 619 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 KRT17Q04695 432 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 CBX2Q14781 532 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 NOMO2Q5JPE7 1267 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 SPOUT1Q5T280 376 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 TWF2Q6IBS0 349 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 GLB1LQ6UWU2 654 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 ASAP3Q8TDY4 903 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 LPPQ93052 612 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 PGBD4Q96DM1 585 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 CCDC51Q96ER9 411 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 MTRQ99707 1265 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 LRFN3Q9BTN0 628 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 NRDE2Q9H7Z3 1164 aa10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 ARIH1Q9Y4X5 557 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-207ENST00000482162 C2orf71A6NGG8 1288 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 POTEMA6NI47 508 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 HIDE1A8MVS5 230 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 PER2O15055 1255 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 B4GALT3O60512 393 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 TSPAN1O60635 241 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 MED24O75448 989 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 EFEMP2O95967 443 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 MUTP22033 750 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms