RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 LRRIQ4A6NIV6 560 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 K7ELQ4 463 aaPredicted RBP16.44■□□□□ 0.22
OPTN-210ENST00000482140 ITGB1P05556 798 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 LAG3P18627 525 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 GLRA2P23416 452 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 POU5F1BQ06416 359 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 CSPP1Q1MSJ5 1256 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 ZNF598Q86UK7 904 aaKnown RBP16.44■□□□□ 0.22
OPTN-210ENST00000482140 THNSL1Q8IYQ7 743 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 COLGALT1Q8NBJ5 622 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 PGBD4Q96DM1 585 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 CASD1Q96PB1 797 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 ASB2Q96Q27 587 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 TRAIPQ9BWF2 469 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 MRPL9Q9BYD2 267 aaKnown RBP16.44■□□□□ 0.22
OPTN-210ENST00000482140 NSUN3Q9H649 340 aaKnown RBP16.44■□□□□ 0.22
OPTN-210ENST00000482140 GPRC5CQ9NQ84 441 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 RNF19AQ9NV58 838 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 PLAGL2Q9UPG8 496 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 ATG2AQ2TAZ0 1938 aa16.44■□□□□ 0.22
OPTN-210ENST00000482140 MYO7AQ13402 2215 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 ATF7P17544 494 aaPredicted RBP16.43■□□□□ 0.22
OPTN-210ENST00000482140 AXLP30530 894 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 ZRSR1Q15695 479 aaKnown RBP16.43■□□□□ 0.22
OPTN-210ENST00000482140 ECM1Q16610 540 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 LONRF3Q496Y0 759 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 CLLU1OSQ5K130 101 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 GLB1LQ6UWU2 654 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 IFNLR1Q8IU57 520 aaPredicted RBP16.43■□□□□ 0.22
OPTN-210ENST00000482140 RSPH1Q8WYR4 309 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 INTS4Q96HW7 963 aaKnown RBP16.43■□□□□ 0.22
OPTN-210ENST00000482140 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 CWH43Q9H720 699 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 HCSTQ9UBK5 93 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 DNM3Q9UQ16 869 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 PCDHB2Q9Y5E7 798 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 PLXNA4Q9HCM2 1894 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 UNC80Q8N2C7 3258 aa16.43■□□□□ 0.22
OPTN-210ENST00000482140 VWA3AA6NCI4 1184 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 PP2D1A8MPX8 630 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 BMP15O95972 392 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 CYP11B2P19099 503 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 CDC25AP30304 524 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 TFF2Q03403 129 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 IL17AQ16552 155 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 TCEAL5Q5H9L2 206 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 ARL6IP4Q66PJ3 421 aaKnown RBP16.42■□□□□ 0.22
OPTN-210ENST00000482140 NOTUMQ6P988 496 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 ZBTB8OSQ8IWT0 167 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 POF1BQ8WVV4 589 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 LPPQ93052 612 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 PPP2R3CQ969Q6 453 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 CDK5RAP3Q96JB5 506 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 ZNF558Q96NG5 402 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 COL25A1Q9BXS0 654 aaPredicted RBP16.42■□□□□ 0.22
OPTN-210ENST00000482140 NFKBIZQ9BYH8 718 aa16.42■□□□□ 0.22
OPTN-210ENST00000482140 UBE2ZQ9H832 354 aaPredicted RBP16.42■□□□□ 0.22
OPTN-210ENST00000482140 TSPAN1O60635 241 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 ZNF623O75123 536 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 FGF18O76093 207 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 EYA4O95677 639 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 HOXA11P31270 313 aaPredicted RBP16.41■□□□□ 0.22
OPTN-210ENST00000482140 PPM1AP35813 382 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 UBE3AQ05086 875 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 MBTD1Q05BQ5 628 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 PPP2R5AQ15172 486 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 EP400NLQ6ZTU2 488 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 CNNM3Q8NE01 707 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 SPPL3Q8TCT6 385 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 URGCPQ8TCY9 931 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 CCDC51Q96ER9 411 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 CPB2Q96IY4 423 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 IFT74Q96LB3 600 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 TRIM6Q9C030 488 aaPredicted RBP16.41■□□□□ 0.22
OPTN-210ENST00000482140 C2orf40Q9H1Z8 148 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 INPP5FQ9Y2H2 1132 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 BRWD1Q9NSI6 2320 aa16.41■□□□□ 0.22
OPTN-210ENST00000482140 TCF20Q9UGU0 1960 aaKnown RBP16.4■□□□□ 0.22
OPTN-210ENST00000482140 E9PMD0 336 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 RNASELQ05823 741 aaKnown RBP16.4■□□□□ 0.22
OPTN-210ENST00000482140 TMEM132AQ24JP5 1023 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 NOMO2Q5JPE7 1267 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 KCNT2Q6UVM3 1135 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 LRRC55Q6ZSA7 311 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 DEPTORQ8TB45 409 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 MICAL1Q8TDZ2 1067 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 KIFAP3Q92845 792 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 NT5C3AQ9H0P0 336 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 PRMT7Q9NVM4 692 aaPredicted RBP16.4■□□□□ 0.22
OPTN-210ENST00000482140 PUF60Q9UHX1 559 aaKnown RBP16.4■□□□□ 0.22
OPTN-210ENST00000482140 CNTNAP2Q9UHC6 1331 aa16.4■□□□□ 0.22
OPTN-210ENST00000482140 NCK2O43639 380 aa16.39■□□□□ 0.21
OPTN-210ENST00000482140 HSP90AA1P07900 732 aaKnown RBP16.39■□□□□ 0.21
OPTN-210ENST00000482140 ITGA4P13612 1032 aa16.39■□□□□ 0.21
OPTN-210ENST00000482140 SYT1P21579 422 aa16.39■□□□□ 0.21
OPTN-210ENST00000482140 KCNA5P22460 613 aa16.39■□□□□ 0.21
OPTN-210ENST00000482140 DNAJB1P25685 340 aa16.39■□□□□ 0.21
OPTN-210ENST00000482140 NAMPTP43490 491 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms