RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 LONRF3Q496Y0 759 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 WWC2Q6AWC2 1192 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 TWF2Q6IBS0 349 aaKnown RBP16.91■□□□□ 0.3
HDAC6-224ENST00000481929 ZNF746Q6NUN9 644 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-224ENST00000481929 PPP1R18Q6NYC8 613 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 TMTC3Q6ZXV5 915 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 SMAP1Q8IYB5 467 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-224ENST00000481929 SECISBP2LQ93073 1101 aaKnown RBP16.91■□□□□ 0.3
HDAC6-224ENST00000481929 TRAIPQ9BWF2 469 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 RHOBTB2Q9BYZ6 727 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 FOXQ1Q9C009 403 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 GABBR1Q9UBS5 961 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 INPPL1O15357 1258 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 PRC1O43663 620 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 GLULP15104 373 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 LMNB2Q03252 620 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 RAB11FIP4Q86YS3 637 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 MAML2Q8IZL2 1156 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-224ENST00000481929 RUFY2Q8WXA3 655 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 SMG7Q92540 1137 aaKnown RBP16.9■□□□□ 0.3
HDAC6-224ENST00000481929 SHDQ96IW2 340 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 ZNF577Q9BSK1 485 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 GCOM2Q9BZD3 368 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-224ENST00000481929 SLC2A4RGQ9NR83 387 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 TBC1D22BQ9NU19 505 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 PCDHA10Q9Y5I2 948 aa16.9■□□□□ 0.3
HDAC6-224ENST00000481929 DOCK8Q8NF50 2099 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 FAM86B1E9PN63 330 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 SH2B2O14492 632 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-224ENST00000481929 LAMTOR5O43504 91 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 LILRB3O75022 631 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 CSDE1O75534 798 aaKnown RBP16.89■□□□□ 0.29
HDAC6-224ENST00000481929 URODP06132 367 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 ADH1AP07327 375 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 FAM86B2P0C5J1 330 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 SFPQP23246 707 aaKnown RBP eCLIP16.89■□□□□ 0.29
HDAC6-224ENST00000481929 NUCB1Q02818 461 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 URGCPQ8TCY9 931 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 TMEM87BQ96K49 555 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 RTKNQ9BST9 563 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 SPATA6Q9NWH7 488 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-224ENST00000481929 FBXO4Q9UKT5 387 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 PIN4Q9Y237 131 aaKnown RBP16.89■□□□□ 0.29
HDAC6-224ENST00000481929 SAMM50Q9Y512 469 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 PCDHGA2Q9Y5H1 932 aa16.89■□□□□ 0.29
HDAC6-224ENST00000481929 USP24Q9UPU5 2620 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 C2CD2LO14523 706 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 LRRN2O75325 713 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 OFD1O75665 1012 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 GLUD1P00367 558 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 LAMP2P13473 410 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 RAB27AP51159 221 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 AK2P54819 239 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 STARD6P59095 220 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 TYW1BQ6NUM6 668 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 ZNF280BQ86YH2 543 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 ATRIPQ8WXE1 791 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 BCO2Q9BYV7 579 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 RWDD1Q9H446 243 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-224ENST00000481929 PIDD1Q9HB75 910 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 NRBP2Q9NSY0 501 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 FAM105AQ9NUU6 356 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.88■□□□□ 0.29
HDAC6-224ENST00000481929 SSX2IPQ9Y2D8 614 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 ZFHX4Q86UP3 3567 aa16.88■□□□□ 0.29
HDAC6-224ENST00000481929 IGLV3-22A0A075B6J6 115 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 DCDC2BA2VCK2 349 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 MEIS3P2A8K0S8 358 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 B4GALT3O60512 393 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 RFPL2O75678 378 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 SOD2P04179 222 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 OATP04181 439 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 MCM5P33992 734 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 SETQ01105 290 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-224ENST00000481929 HTR4Q13639 388 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 GET4Q7L5D6 327 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-224ENST00000481929 FANCBQ8NB91 859 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 PGBD4Q96DM1 585 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 RPS6KC1Q96S38 1066 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 TMEM175Q9BSA9 504 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 GLT8D2Q9H1C3 349 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 USP18Q9UMW8 372 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 SMG5Q9UPR3 1016 aaKnown RBP16.87■□□□□ 0.29
HDAC6-224ENST00000481929 FAN1Q9Y2M0 1017 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 NUMBLQ9Y6R0 609 aa16.87■□□□□ 0.29
HDAC6-224ENST00000481929 SMCO2A6NFE2 343 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 WDR64B1ANS9 1081 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 ANHXE9PGG2 379 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 TEX28O15482 410 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 ALDH2P05091 517 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 ADRB1P08588 477 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 MYBP10242 640 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 LIFRP42702 1097 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 CLK2P49760 499 aaKnown RBP16.86■□□□□ 0.29
HDAC6-224ENST00000481929 CDC42EP1Q00587 391 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 PRKCEQ02156 737 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 CSTF1Q05048 431 aaKnown RBP16.86■□□□□ 0.29
HDAC6-224ENST00000481929 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 FAM193BQ96PV7 902 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms