RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 TCF25Q9BQ70 676 aa24.79■■□□□ 1.56
GPCPD1-206ENST00000481690 FAM105AQ9NUU6 356 aa24.79■■□□□ 1.56
GPCPD1-206ENST00000481690 SPG21Q9NZD8 308 aa24.79■■□□□ 1.56
GPCPD1-206ENST00000481690 PRKAG3Q9UGI9 489 aa24.79■■□□□ 1.56
GPCPD1-206ENST00000481690 RAPGEFL1Q9UHV5 662 aa24.79■■□□□ 1.56
GPCPD1-206ENST00000481690 LZTS1Q9Y250 596 aa24.79■■□□□ 1.56
GPCPD1-206ENST00000481690 FSCN2O14926 492 aa24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 SLITRK3O94933 977 aa24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 GLP2RO95838 553 aa24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 KRT17Q04695 432 aa24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 SMAD2Q15796 467 aaKnown RBP24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 PDE12Q6L8Q7 609 aaKnown RBP24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 ADHFE1Q8IWW8 467 aa24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 AGPAT5Q9NUQ2 364 aa24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 CLEC1BQ9P126 229 aa24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 INPP5FQ9Y2H2 1132 aa24.78■■□□□ 1.56
GPCPD1-206ENST00000481690 MCM7P33993 719 aa24.77■■□□□ 1.56
GPCPD1-206ENST00000481690 RAB27AP51159 221 aa24.77■■□□□ 1.56
GPCPD1-206ENST00000481690 SRGAP1Q7Z6B7 1085 aa24.77■■□□□ 1.56
GPCPD1-206ENST00000481690 FERMT3Q86UX7 667 aa24.77■■□□□ 1.56
GPCPD1-206ENST00000481690 RNF149Q8NC42 400 aa24.77■■□□□ 1.56
GPCPD1-206ENST00000481690 MSLNLQ96KJ4 702 aa24.77■■□□□ 1.56
GPCPD1-206ENST00000481690 TRAIPQ9BWF2 469 aa24.77■■□□□ 1.56
GPCPD1-206ENST00000481690 FAM86C2PA6NEL3 165 aa24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 POTEMA6NI47 508 aa24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 PI4K2BG5E9Z4 385 aa24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 RBM10P98175 930 aaKnown RBP24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 DUSP6Q16828 381 aa24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 TMEM31Q5JXX7 168 aa24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 GLB1LQ6UWU2 654 aa24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 TMC7Q7Z402 723 aa24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 SLC39A11Q8N1S5 342 aa24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 CDCA3Q99618 268 aaPredicted RBP24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 LLPHQ9BRT6 129 aaKnown RBP24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 MINDY3Q9H8M7 445 aa24.76■■□□□ 1.55
GPCPD1-206ENST00000481690 MEIS3P2A8K0S8 358 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 NT5C1B-RDH14C9J2C7 533 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 ASAP2O43150 1006 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 ZC3H11AO75152 810 aaKnown RBP eCLIP24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 CA8P35219 290 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 ALDH7A1P49419 539 aaKnown RBP24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 BCAR1P56945 870 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 ZSCAN31Q96LW9 406 aaPredicted RBP24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 MTMR9Q96QG7 549 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 HSD17B14Q9BPX1 270 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 LRFN3Q9BTN0 628 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 TMEM60Q9H2L4 133 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 XPNPEP1Q9NQW7 623 aa24.75■■□□□ 1.55
GPCPD1-206ENST00000481690 FSD2A1L4K1 749 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 ERLIN2O94905 339 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 LYPLA2O95372 231 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 RNASELQ05823 741 aaKnown RBP24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 COASYQ13057 564 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 GNL2Q13823 731 aaKnown RBP24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 C8orf34Q49A92 452 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 FAM184AQ8NB25 1140 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 SMRP1Q8NCR6 262 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 PGBD4Q96DM1 585 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 POP1Q99575 1024 aaKnown RBP24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 NGRNQ9NPE2 291 aaKnown RBP24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 ANKEF1Q9NU02 776 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 PCDHB2Q9Y5E7 798 aa24.74■■□□□ 1.55
GPCPD1-206ENST00000481690 HIDE1A8MVS5 230 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 DGAT1O75907 488 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 EYA4O95677 639 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 NOMO2Q5JPE7 1267 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 LLGL2Q6P1M3 1020 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 VN1R2Q8NFZ6 395 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 PIGOQ8TEQ8 1089 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 RSPH1Q8WYR4 309 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 TMEM169Q96HH4 297 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 GBP3Q9H0R5 595 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 TBC1D13Q9NVG8 400 aa24.73■■□□□ 1.55
GPCPD1-206ENST00000481690 A0A087WWV3 80 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 C19orf67A6NJJ6 358 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 ZNF623O75123 536 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 OFD1O75665 1012 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 SRGAP2BP0DMP2 458 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 ALADP13716 330 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 RARRES1P49788 294 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 HMGN5P82970 282 aaKnown RBP24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 TFDP1Q14186 410 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 MXD4Q14582 209 aaPredicted RBP24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 ASAP3Q8TDY4 903 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 C11orf16Q9NQ32 467 aa24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 SH2B1Q9NRF2 756 aaPredicted RBP24.72■■□□□ 1.55
GPCPD1-206ENST00000481690 INO80B-WBP1J3KQ70 363 aa24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 USO1O60763 962 aaKnown RBP24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 SMC1AQ14683 1233 aaKnown RBP24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 ZNF174Q15697 407 aa24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 URGCPQ8TCY9 931 aa24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 KIF2CQ99661 725 aa24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 FOXP1Q9H334 677 aaPredicted RBP24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 NRDE2Q9H7Z3 1164 aa24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 RSAD1Q9HA92 442 aa24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 USP15Q9Y4E8 981 aaPredicted RBP24.71■■□□□ 1.55
GPCPD1-206ENST00000481690 DCXO43602 365 aa24.7■■□□□ 1.54
GPCPD1-206ENST00000481690 GPR37L1O60883 481 aa24.7■■□□□ 1.54
GPCPD1-206ENST00000481690 OR52Z1P0C646 297 aa24.7■■□□□ 1.54
GPCPD1-206ENST00000481690 HOXA11P31270 313 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms