RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CALCRLQ16602 461 aa20.74■□□□□ 0.91
CLK1-211ENST00000481641 SLC39A11Q8N1S5 342 aa20.74■□□□□ 0.91
CLK1-211ENST00000481641 SMRP1Q8NCR6 262 aa20.74■□□□□ 0.91
CLK1-211ENST00000481641 PSPC1Q8WXF1 523 aaKnown RBP20.74■□□□□ 0.91
CLK1-211ENST00000481641 EIF2AK1Q9BQI3 630 aaKnown RBP20.74■□□□□ 0.91
CLK1-211ENST00000481641 ZSWIM4Q9H7M6 989 aa20.74■□□□□ 0.91
CLK1-211ENST00000481641 FAM105AQ9NUU6 356 aa20.74■□□□□ 0.91
CLK1-211ENST00000481641 A0A087WWV3 80 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 RFC5P40937 340 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 BCAR1P56945 870 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 PDE12Q6L8Q7 609 aaKnown RBP20.73■□□□□ 0.91
CLK1-211ENST00000481641 LLGL2Q6P1M3 1020 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 OTUD6AQ7L8S5 288 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 TMC7Q7Z402 723 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 TRAIPQ9BWF2 469 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 PCDHA12Q9UN75 941 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 INPP5FQ9Y2H2 1132 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 USP15Q9Y4E8 981 aaPredicted RBP20.73■□□□□ 0.91
CLK1-211ENST00000481641 ARID2Q68CP9 1835 aa20.73■□□□□ 0.91
CLK1-211ENST00000481641 DCXO43602 365 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 ALADP13716 330 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 ATP2B1P20020 1258 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 PPM1AP35813 382 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 TXKP42681 527 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 KRT17Q04695 432 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 TRIM29Q14134 588 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 TMEM173Q86WV6 379 aaPredicted RBP20.72■□□□□ 0.91
CLK1-211ENST00000481641 CCDC83Q8IWF9 413 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 CDCA3Q99618 268 aaPredicted RBP20.72■□□□□ 0.91
CLK1-211ENST00000481641 APOL5Q9BWW9 433 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 MRPL9Q9BYD2 267 aaKnown RBP20.72■□□□□ 0.91
CLK1-211ENST00000481641 TTC12Q9H892 705 aaPredicted RBP20.72■□□□□ 0.91
CLK1-211ENST00000481641 XPNPEP1Q9NQW7 623 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 AGPAT5Q9NUQ2 364 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 PPME1Q9Y570 386 aa20.72■□□□□ 0.91
CLK1-211ENST00000481641 NEMFO60524 1076 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 ZC3H11AO75152 810 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLK1-211ENST00000481641 OFD1O75665 1012 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 SRGAP1Q7Z6B7 1085 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 FERMT3Q86UX7 667 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 EXOC8Q8IYI6 725 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 RNF149Q8NC42 400 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 MTRQ99707 1265 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 HSD17B14Q9BPX1 270 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 TMEM60Q9H2L4 133 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 NRDE2Q9H7Z3 1164 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 NGRNQ9NPE2 291 aaKnown RBP20.71■□□□□ 0.91
CLK1-211ENST00000481641 TBC1D13Q9NVG8 400 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 MUTYHQ9UIF7 546 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 PCDHB2Q9Y5E7 798 aa20.71■□□□□ 0.91
CLK1-211ENST00000481641 B4GALT3O60512 393 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 ZNF623O75123 536 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 SKIP12755 728 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 HOXA11P31270 313 aaPredicted RBP20.7■□□□□ 0.9
CLK1-211ENST00000481641 TECP42680 631 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 ALDH7A1P49419 539 aaKnown RBP20.7■□□□□ 0.9
CLK1-211ENST00000481641 KCNC3Q14003 757 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 NOMO2Q5JPE7 1267 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 UBXN11Q5T124 520 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 GLB1LQ6UWU2 654 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 RNF135Q8IUD6 432 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 TCP11Q8WWU5 503 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 MTMR9Q96QG7 549 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 POP1Q99575 1024 aaKnown RBP20.7■□□□□ 0.9
CLK1-211ENST00000481641 GBP3Q9H0R5 595 aa20.7■□□□□ 0.9
CLK1-211ENST00000481641 POTEMA6NI47 508 aa20.69■□□□□ 0.9
CLK1-211ENST00000481641 CA8P35219 290 aa20.69■□□□□ 0.9
CLK1-211ENST00000481641 RAB27AP51159 221 aa20.69■□□□□ 0.9
CLK1-211ENST00000481641 AFF1P51825 1210 aaKnown RBP20.69■□□□□ 0.9
CLK1-211ENST00000481641 AGMOQ6ZNB7 445 aa20.69■□□□□ 0.9
CLK1-211ENST00000481641 ASAP3Q8TDY4 903 aa20.69■□□□□ 0.9
CLK1-211ENST00000481641 PIGOQ8TEQ8 1089 aa20.69■□□□□ 0.9
CLK1-211ENST00000481641 BCL7CQ8WUZ0 217 aaPredicted RBP20.69■□□□□ 0.9
CLK1-211ENST00000481641 AUTS2Q8WXX7 1259 aa20.69■□□□□ 0.9
CLK1-211ENST00000481641 DNAJB4Q9UDY4 337 aa20.69■□□□□ 0.9
CLK1-211ENST00000481641 LIMCH1Q9UPQ0 1083 aa20.69■□□□□ 0.9
CLK1-211ENST00000481641 C2orf71A6NGG8 1288 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 ASAP2O43150 1006 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 GAS2O43903 313 aaKnown RBP20.68■□□□□ 0.9
CLK1-211ENST00000481641 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
CLK1-211ENST00000481641 GALTP07902 379 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 MCM7P33993 719 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 RNASELQ05823 741 aaKnown RBP20.68■□□□□ 0.9
CLK1-211ENST00000481641 SMC1AQ14683 1233 aaKnown RBP20.68■□□□□ 0.9
CLK1-211ENST00000481641 ANKRD54Q6NXT1 300 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 SYCE2Q6PIF2 218 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 ZNF280BQ86YH2 543 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 MRPL43Q8N983 215 aaKnown RBP20.68■□□□□ 0.9
CLK1-211ENST00000481641 TMEM169Q96HH4 297 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 S1PR5Q9H228 398 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 TRIOO75962 3097 aa20.68■□□□□ 0.9
CLK1-211ENST00000481641 PRR33A8MZF0 331 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 LYPLA2O95372 231 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 CXCL14O95715 111 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 SLC11A1P49279 550 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 TMEM184AQ6ZMB5 413 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 MRPL10Q7Z7H8 261 aaKnown RBP20.67■□□□□ 0.9
CLK1-211ENST00000481641 VPS52Q8N1B4 723 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 SUSD6Q92537 303 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 PGBD4Q96DM1 585 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms