RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 LLPHQ9BRT6 129 aaKnown RBP13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 ENTPD7Q9NQZ7 604 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 WRAP73Q9P2S5 460 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 HCSTQ9UBK5 93 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 DAXXQ9UER7 740 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 CNTNAP2Q9UHC6 1331 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 DGAT1O75907 488 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 CSPG5O95196 566 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 HOXB8P17481 243 aaPredicted RBP13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 FGFR4P22455 802 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 AXLP30530 894 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 NPEPPSP55786 919 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 ERVFC1P60507 584 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 KCNC3Q14003 757 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 SMC1AQ14683 1233 aaKnown RBP13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 SAFBQ15424 915 aaKnown RBP eCLIP13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 HERC4Q5GLZ8 1057 aaPredicted RBP13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 RBM23Q86U06 439 aaKnown RBP13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 FERMT3Q86UX7 667 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 RNF169Q8NCN4 708 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 CNNM3Q8NE01 707 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 HELQQ8TDG4 1101 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 CCDC51Q96ER9 411 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 TMEM169Q96HH4 297 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 DYDC2Q96IM9 177 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 HSD17B14Q9BPX1 270 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 C11orf16Q9NQ32 467 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 ANKEF1Q9NU02 776 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 IRAK3Q9Y616 596 aa13.54□□□□□ -0.24
SQSTM1-207ENST00000481335 TRIOO75962 3097 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 TDRD15B5MCY1 1934 aaKnown RBP13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 BTBD18B2RXH4 712 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 CSDE1O75534 798 aaKnown RBP13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 SLITRK3O94933 977 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 XRCC6P12956 609 aaKnown RBP eCLIP13.53□□□□□ -0.241e-5■■■□□ 14.9
SQSTM1-207ENST00000481335 LAMTOR4Q0VGL1 99 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 TFDP1Q14186 410 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 CBX2Q14781 532 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 CLUL1Q15846 466 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 XKR9Q5GH70 373 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 NOMO2Q5JPE7 1267 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 PLPP4Q5VZY2 271 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 PRPF31Q8WWY3 499 aaKnown RBP13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 SUSD6Q92537 303 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 CASP10Q92851 521 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 EIF2AK1Q9BQI3 630 aaKnown RBP13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 PHF7Q9BWX1 381 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 NFKBIZQ9BYH8 718 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 TTC12Q9H892 705 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 UBN1Q9NPG3 1134 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 RGL1Q9NZL6 768 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 KANSL3Q9P2N6 904 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 BARX2Q9UMQ3 279 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
SQSTM1-207ENST00000481335 FAM205CA6NFA0 338 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 LOC730098B7Z3J9 87 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 ERLIN2O94905 339 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 PLA2G5P39877 138 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 BCAR1P56945 870 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 HMGN5P82970 282 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 CYP4A11Q02928 519 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 NCBP1Q09161 790 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 CTTNQ14247 550 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 TMC7Q7Z402 723 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 MRPL10Q7Z7H8 261 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 KSR1Q8IVT5 923 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 TPH2Q8IWU9 490 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 MRPL43Q8N983 215 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 RNF149Q8NC42 400 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 URGCPQ8TCY9 931 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 TMEM143Q96AN5 459 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 CCDC43Q96MW1 224 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 MTMR9Q96QG7 549 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 KCNH6Q9H252 994 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 FOXP1Q9H334 677 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 SH2B1Q9NRF2 756 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 TBC1D13Q9NVG8 400 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 USP15Q9Y4E8 981 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 PCDHB2Q9Y5E7 798 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 PCDHGC5Q9Y5F6 944 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 ZMYM2Q9UBW7 1377 aa13.52□□□□□ -0.25
SQSTM1-207ENST00000481335 ZNF318Q5VUA4 2279 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 PER2O15055 1255 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 JAK2O60674 1132 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 OFD1O75665 1012 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 NCLP19338 710 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 MUTP22033 750 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 HOXA11P31270 313 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 RARRES1P49788 294 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 PTENP60484 403 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 RNASELQ05823 741 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 TPRNQ4KMQ1 711 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 ANKRD54Q6NXT1 300 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 NOTUMQ6P988 496 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 DDX53Q86TM3 631 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms