RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 THEM5Q8N1Q8 247 aa20.77■□□□□ 0.92
CCM2-214ENST00000481194 SREK1Q8WXA9 508 aaKnown RBP20.77■□□□□ 0.92
CCM2-214ENST00000481194 COL1A1P02452 1464 aaPredicted RBP20.77■□□□□ 0.92
CCM2-214ENST00000481194 RRP9O43818 475 aaKnown RBP20.77■□□□□ 0.91
CCM2-214ENST00000481194 NAMPTP43490 491 aa20.77■□□□□ 0.91
CCM2-214ENST00000481194 CFAP58Q5T655 872 aa20.77■□□□□ 0.91
CCM2-214ENST00000481194 DNAJC24Q6P3W2 148 aa20.77■□□□□ 0.91
CCM2-214ENST00000481194 PDLIM2Q96JY6 352 aa20.77■□□□□ 0.91
CCM2-214ENST00000481194 FUT2Q10981 343 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 SAAL1Q96ER3 474 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 SPDYE5A6NIY4 337 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 UNCXA6NJT0 531 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 E7EVH7 732 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 HSPA6P17066 643 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 MTMR9Q96QG7 549 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 TAF1DQ9H5J8 278 aaPredicted RBP20.76■□□□□ 0.91
CCM2-214ENST00000481194 SIPA1L3O60292 1781 aaPredicted RBP20.76■□□□□ 0.91
CCM2-214ENST00000481194 EMSYQ7Z589 1322 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 FAM237AA0A1B0GTK4 181 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 SMIM22K7EJ46 135 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 EFCAB12Q6NXP0 572 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 NRAPQ86VF7 1730 aa20.76■□□□□ 0.91
CCM2-214ENST00000481194 GABPB2Q8TAK5 448 aaPredicted RBP20.75■□□□□ 0.91
CCM2-214ENST00000481194 PGBD4Q96DM1 585 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 PBKQ96KB5 322 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 HEXIM2Q96MH2 286 aaKnown RBP20.75■□□□□ 0.91
CCM2-214ENST00000481194 LRRC53A6NM62 1247 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 EXTL3O43909 919 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 MYBPC2Q14324 1141 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 CCDC105Q8IYK2 499 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 RUSC1Q9BVN2 902 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 PGK2P07205 417 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 ALKBH5Q6P6C2 394 aaKnown RBP20.75■□□□□ 0.91
CCM2-214ENST00000481194 ZNF384Q8TF68 577 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 DIS3Q9Y2L1 958 aaKnown RBP20.75■□□□□ 0.91
CCM2-214ENST00000481194 HUS1O60921 280 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 MUM1L1Q5H9M0 696 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 REM2Q8IYK8 340 aaPredicted RBP20.75■□□□□ 0.91
CCM2-214ENST00000481194 A1CFQ9NQ94 594 aaKnown RBP20.75■□□□□ 0.91
CCM2-214ENST00000481194 PAPPAQ13219 1627 aa20.75■□□□□ 0.91
CCM2-214ENST00000481194 C17orf102A2RUQ5 167 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 KCNMB3Q9NPA1 279 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 STRIP2Q9ULQ0 834 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 MYBL1P10243 752 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 ATP5DP30049 168 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 GOLGA8FQ08AF8 430 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 GOLGA8DPQ0D2H9 430 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 DCAF4L1Q3SXM0 396 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 PDXDC1Q6P996 788 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 TRIM50Q86XT4 487 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 CPA4Q9UI42 421 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 JRKLQ9Y4A0 524 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 FAM86B1E9PN63 330 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 IRF6O14896 467 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 FAM86B2P0C5J1 330 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 LMNB2Q03252 620 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 EARS2Q5JPH6 523 aaKnown RBP20.74■□□□□ 0.91
CCM2-214ENST00000481194 SH3BP5LQ7L8J4 393 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 OTOP1Q7RTM1 612 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 TMEM35BQ8NCS4 154 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 NFASCO94856 1347 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 CYP2C9P11712 490 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 CD58P19256 250 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 MTMR3Q13615 1198 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 GIT2Q14161 759 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 FBXO16Q8IX29 292 aaPredicted RBP20.74■□□□□ 0.91
CCM2-214ENST00000481194 WNK4Q96J92 1243 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 TBX20Q9UMR3 447 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 LOC102724159A0A0B4J2E5 919 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 CALB1P05937 261 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 PWP2Q15269 919 aaKnown RBP20.74■□□□□ 0.91
CCM2-214ENST00000481194 SNRNP35Q16560 246 aaKnown RBP20.74■□□□□ 0.91
CCM2-214ENST00000481194 ABHD16BQ9H3Z7 469 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 ASIC3Q9UHC3 531 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 CDC23Q9UJX2 597 aa20.74■□□□□ 0.91
CCM2-214ENST00000481194 TJP1Q07157 1748 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 A0A1W2PQJ5 194 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 KRIT1O00522 736 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 PTGER2P43116 358 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 OLFML3Q9NRN5 406 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 EFCAB8A8MWE9 144 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 MEIS2O14770 477 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 IVLP07476 585 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 ANKRD23Q86SG2 305 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 KRT222Q8N1A0 295 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 BBOF1Q8ND07 529 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 LRRC4Q9HBW1 653 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 ANKRD36CQ5JPF3 1778 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 ATF7IP2Q5U623 682 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 PCSK9Q8NBP7 692 aaKnown RBP20.73■□□□□ 0.91
CCM2-214ENST00000481194 POLD4Q9HCU8 107 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 GOLGA6CA6NDK9 693 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 GOLGA6BA6NDN3 693 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 SLC15A5A6NIM6 579 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 SPDYE16A6NNV3 312 aaPredicted RBP20.73■□□□□ 0.91
CCM2-214ENST00000481194 GOLGA6DP0CG33 693 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 ELMSAN1Q6PJG2 1045 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 CCDC89Q8N998 374 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 C7orf43Q8WVR3 580 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 GOLGA6AQ9NYA3 693 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms