RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 THBDP07204 575 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 MTHFD2P13995 350 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 HOXD13P35453 343 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 RAB1AP62820 205 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 PCSK7Q16549 785 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 KIF4BQ2VIQ3 1234 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 PPM1JQ5JR12 505 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 WDR89Q96FK6 387 aaPredicted RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 CNDP2Q96KP4 475 aaKnown RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 SIL1Q9H173 461 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 C14orf93Q9H972 538 aaKnown RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 ZMAT3Q9HA38 289 aaKnown RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 SP110Q9HB58 689 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 CATSPERZQ9NTU4 200 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 C17orf113A0A1B0GUU1 675 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 SLC12A8A0AV02 714 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 AOC2O75106 756 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 SGPL1O95470 568 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 F11P03951 625 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 DESP17661 470 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 CD40P25942 277 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 MAOBP27338 520 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 ABCD1P33897 745 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 MRE11P49959 708 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 MRPS35P82673 323 aaKnown RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 IRF9Q00978 393 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 PTK2BQ14289 1009 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 RASA2Q15283 850 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 DLGAP5Q15398 846 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 CRY1Q16526 586 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 PAN2Q504Q3 1202 aaKnown RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 PARP10Q53GL7 1025 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 TRMT2AQ8IZ69 625 aaKnown RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 SPPL3Q8TCT6 385 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 ZUFSPQ96AP4 578 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 YME1L1Q96TA2 773 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 GPATCH1Q9BRR8 931 aaKnown RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 ZMAT4Q9H898 229 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 IPPKQ9H8X2 491 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 CYP4F11Q9HBI6 524 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 HERC5Q9UII4 1024 aaKnown RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 CBLCQ9ULV8 474 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 RNF112Q9ULX5 631 aa9.08□□□□□ -0.96
LSM5-210ENST00000480956 C19orf53Q9UNZ5 99 aaPredicted RBP9.08□□□□□ -0.96
LSM5-210ENST00000480956 CCDC196A0A1B0GTZ2 297 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 ZSCAN22P10073 491 aaPredicted RBP9.07□□□□□ -0.96
LSM5-210ENST00000480956 ALAS2P22557 587 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 CTSSP25774 331 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 LTBRP36941 435 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 AFF1P51825 1210 aaKnown RBP9.07□□□□□ -0.96
LSM5-210ENST00000480956 RNF4P78317 190 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.07□□□□□ -0.96
LSM5-210ENST00000480956 ZBTB37Q5TC79 503 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 MBNL2Q5VZF2 373 aaKnown RBP9.07□□□□□ -0.96
LSM5-210ENST00000480956 UNC5DQ6UXZ4 953 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 B4GALNT4Q76KP1 1039 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 ARHGEF25Q86VW2 580 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 CREG2Q8IUH2 290 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 SAMD14Q8IZD0 417 aaPredicted RBP9.07□□□□□ -0.96
LSM5-210ENST00000480956 KCNC2Q96PR1 638 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 HEPHQ9BQS7 1158 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 AGXT2Q9BYV1 514 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 DEF6Q9H4E7 631 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 DCAF16Q9NXF7 216 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 SF3B6Q9Y3B4 125 aaKnown RBP9.07□□□□□ -0.96
LSM5-210ENST00000480956 PCDHGC4Q9Y5F7 938 aa9.07□□□□□ -0.96
LSM5-210ENST00000480956 CCDC154A6NI56 674 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 F8W8V4 182 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 FANCGO15287 622 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 PHGDHO43175 533 aaKnown RBP9.06□□□□□ -0.96
LSM5-210ENST00000480956 ARHGAP6O43182 974 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 B3GALNT1O75752 331 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 CLTBP09497 229 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 USP11P51784 963 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 HSD17B7P56937 341 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 VAMP2P63027 116 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 NEUROD1Q13562 356 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 UGT8Q16880 541 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 CT83Q5H943 113 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 UBXN11Q5T124 520 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 RPUSD3Q6P087 351 aaKnown RBP9.06□□□□□ -0.96
LSM5-210ENST00000480956 DNAJB7Q7Z6W7 309 aaPredicted RBP9.06□□□□□ -0.96
LSM5-210ENST00000480956 NPLOC4Q8TAT6 608 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 COPS5Q92905 334 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 RILPL2Q969X0 211 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 ZNF775Q96BV0 537 aaPredicted RBP9.06□□□□□ -0.96
LSM5-210ENST00000480956 GPATCH2Q9NW75 528 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 MSRAQ9UJ68 235 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 LIMCH1Q9UPQ0 1083 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 KNSTRNQ9Y448 316 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 DAGLAQ9Y4D2 1042 aa9.06□□□□□ -0.96
LSM5-210ENST00000480956 FAM47E-STBD1D6RA91 191 aa9.05□□□□□ -0.96
LSM5-210ENST00000480956 H0Y3Z8 333 aa9.05□□□□□ -0.96
LSM5-210ENST00000480956 TGDSO95455 350 aa9.05□□□□□ -0.96
LSM5-210ENST00000480956 MAPTP10636 758 aaKnown RBP9.05□□□□□ -0.96
LSM5-210ENST00000480956 EPHA1P21709 976 aa9.05□□□□□ -0.96
LSM5-210ENST00000480956 CHMP24386 653 aa9.05□□□□□ -0.96
LSM5-210ENST00000480956 TNP2Q05952 138 aa9.05□□□□□ -0.96
LSM5-210ENST00000480956 EFR3AQ14156 821 aa9.05□□□□□ -0.96
LSM5-210ENST00000480956 TSTQ16762 297 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms