RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SLITRK3O94933 977 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 OR52Z1P0C646 297 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 SSTR3P32745 418 aaPredicted RBP12.74□□□□□ -0.37
CCM2-213ENST00000480658 CYP4A11Q02928 519 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 RNASELQ05823 741 aaKnown RBP12.74□□□□□ -0.37
CCM2-213ENST00000480658 COASYQ13057 564 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 DRP2Q13474 957 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
CCM2-213ENST00000480658 SMAD2Q15796 467 aaKnown RBP12.74□□□□□ -0.37
CCM2-213ENST00000480658 ZNF598Q86UK7 904 aaKnown RBP12.74□□□□□ -0.37
CCM2-213ENST00000480658 IFNLR1Q8IU57 520 aaPredicted RBP12.74□□□□□ -0.37
CCM2-213ENST00000480658 ADHFE1Q8IWW8 467 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 KCTD17Q8N5Z5 321 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 TMEM87AQ8NBN3 555 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 RNF149Q8NC42 400 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 PRIMPOLQ96LW4 560 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 NACC1Q96RE7 527 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 POLR3CQ9BUI4 534 aaPredicted RBP12.74□□□□□ -0.37
CCM2-213ENST00000480658 CWH43Q9H720 699 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 TLE6Q9H808 572 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 DBR1Q9UK59 544 aaKnown RBP12.74□□□□□ -0.37
CCM2-213ENST00000480658 FNDC1Q4ZHG4 1894 aaPredicted RBP12.74□□□□□ -0.37
CCM2-213ENST00000480658 EVPLQ92817 2033 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 H3BQ06 376 aaPredicted RBP12.73□□□□□ -0.37
CCM2-213ENST00000480658 EYA4O95677 639 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 SRGAP2CP0DJJ0 459 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
CCM2-213ENST00000480658 MCM7P33993 719 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 NPEPPSP55786 919 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 ADAM15Q13444 863 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 CTTNQ14247 550 aaKnown RBP12.73□□□□□ -0.37
CCM2-213ENST00000480658 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 C8orf34Q49A92 452 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 NOMO2Q5JPE7 1267 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 EARS2Q5JPH6 523 aaKnown RBP12.73□□□□□ -0.37
CCM2-213ENST00000480658 ELMSAN1Q6PJG2 1045 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 APBB1IPQ7Z5R6 666 aaPredicted RBP12.73□□□□□ -0.37
CCM2-213ENST00000480658 ZBTB8OSQ8IWT0 167 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 FAM193BQ96PV7 902 aaPredicted RBP12.73□□□□□ -0.37
CCM2-213ENST00000480658 TCF25Q9BQ70 676 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
CCM2-213ENST00000480658 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 RGL1Q9NZL6 768 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 SSX2IPQ9Y2D8 614 aa12.73□□□□□ -0.37
CCM2-213ENST00000480658 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 ARID2Q68CP9 1835 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 TMEM150BA6NC51 233 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 FSCN2O14926 492 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 SEC24BO95487 1268 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 RPA1P27694 616 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 NRIP1P48552 1158 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 RARRES1P49788 294 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 GATMP50440 423 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCM2-213ENST00000480658 PTENP60484 403 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 CAMK1Q14012 370 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 CLLU1OSQ5K130 101 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 TTC38Q5R3I4 469 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 TMEM184AQ6ZMB5 413 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 TMC7Q7Z402 723 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 SMRP1Q8NCR6 262 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 HELQQ8TDG4 1101 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 CASP10Q92851 521 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 TMEM143Q96AN5 459 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 TMEM175Q9BSA9 504 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 IGFLR1Q9H665 355 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 RSAD1Q9HA92 442 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 WRAP73Q9P2S5 460 aaPredicted RBP12.72□□□□□ -0.37
CCM2-213ENST00000480658 DPP7Q9UHL4 492 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 KCNG1Q9UIX4 513 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 HCN4Q9Y3Q4 1203 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 ARIH1Q9Y4X5 557 aaPredicted RBP12.72□□□□□ -0.37
CCM2-213ENST00000480658 PCDHB2Q9Y5E7 798 aa12.72□□□□□ -0.37
CCM2-213ENST00000480658 REV3LO60673 3130 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 FAM205CA6NFA0 338 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 POTEMA6NI47 508 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 PI4K2BG5E9Z4 385 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 INO80B-WBP1J3KQ70 363 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 ZC3H11AO75152 810 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCM2-213ENST00000480658 IL9P15248 144 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 ATF7P17544 494 aaPredicted RBP12.71□□□□□ -0.37
CCM2-213ENST00000480658 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.37
CCM2-213ENST00000480658 U2AF2P26368 475 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCM2-213ENST00000480658 LTBRP36941 435 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 BCAR1P56945 870 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 PDIA5Q14554 519 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 DUSP6Q16828 381 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 RILPL1Q5EBL4 403 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 TMEM31Q5JXX7 168 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 PPFIBP1Q86W92 1011 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 SLC39A11Q8N1S5 342 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 MSLNLQ96KJ4 702 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 SH2D3AQ9BRG2 576 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 PRMT7Q9NVM4 692 aaPredicted RBP12.71□□□□□ -0.37
CCM2-213ENST00000480658 DZANK1Q9NVP4 752 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.71□□□□□ -0.37
CCM2-213ENST00000480658 IRAK3Q9Y616 596 aa12.71□□□□□ -0.37
CCM2-213ENST00000480658 ARHGEF35A5YM69 484 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 INPPL1O15357 1258 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms