RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 ANP32BQ92688 251 aaKnown RBP9.11□□□□□ -0.95
USP54-212ENST00000480210 WNT8BQ93098 351 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 HVCN1Q96D96 273 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 DNAJC19Q96DA6 116 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 CCDC51Q96ER9 411 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 PAGE5Q96GU1 130 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 CHAMP1Q96JM3 812 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 NLRP4Q96MN2 994 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 OSMRQ99650 979 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 FDXACB1Q9BRP7 624 aaPredicted RBP9.11□□□□□ -0.95
USP54-212ENST00000480210 TRIM9Q9C026 710 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 WNT8AQ9H1J5 351 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 IFT122Q9HBG6 1241 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 KMT5AQ9NQR1 393 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 OLFML3Q9NRN5 406 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 C1orf112Q9NSG2 853 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 DACT1Q9NYF0 836 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 ZMYND8Q9ULU4 1186 aaPredicted RBP9.11□□□□□ -0.95
USP54-212ENST00000480210 PCDHB13Q9Y5F0 798 aa9.11□□□□□ -0.95
USP54-212ENST00000480210 A0A1W2PPC1 479 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 LRRIQ4A6NIV6 560 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 CCDC169A6NNP5 214 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 NBNO60934 754 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 ERLIN2O94905 339 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 KIF20AO95235 890 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 SMC2O95347 1197 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 MBD3O95983 291 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 CTSHP09668 335 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 CSF2RAP15509 400 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 SYN1P17600 705 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 ITGB8P26012 769 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 NPTX2P47972 431 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 NCKAP1LP55160 1127 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 PEX3P56589 373 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 TMEM62Q0P6H9 643 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 STRN3Q13033 797 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 MAPK7Q13164 816 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 DRP2Q13474 957 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 CAPSQ13938 189 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 LPIN1Q14693 890 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 SKOR2Q2VWA4 1001 aaPredicted RBP9.1□□□□□ -0.95
USP54-212ENST00000480210 HERC4Q5GLZ8 1057 aaPredicted RBP9.1□□□□□ -0.95
USP54-212ENST00000480210 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.1□□□□□ -0.95
USP54-212ENST00000480210 DYMQ7RTS9 669 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 FAM178BQ8IXR5 827 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 DAW1Q8N136 415 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 PHOSPHO2Q8TCD6 241 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 ASAP3Q8TDY4 903 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 HERVK_113Q902F9 699 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 SCLYQ96I15 445 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 GDF15Q99988 308 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 REEP2Q9BRK0 252 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 TRAIPQ9BWF2 469 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 IFIH1Q9BYX4 1025 aaKnown RBP9.1□□□□□ -0.95
USP54-212ENST00000480210 FZD8Q9H461 694 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 ERVK-5Q9HDB9 667 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 LMBRD1Q9NUN5 540 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 PANK4Q9NVE7 773 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 ARHGAP28Q9P2N2 729 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 PADI3Q9ULW8 664 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 ST3GAL5Q9UNP4 418 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 EXOC7Q9UPT5 735 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 GINS2Q9Y248 185 aa9.1□□□□□ -0.95
USP54-212ENST00000480210 UMODL1Q5DID0 1318 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 CITO14578 2027 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 H0YGN5 161 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 INO80B-WBP1J3KQ70 363 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 ACKR2O00590 384 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 GHRP10912 638 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 IDEP14735 1019 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 PPP1R2P41236 205 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 MAGEA10P43363 369 aaPredicted RBP9.09□□□□□ -0.95
USP54-212ENST00000480210 AFMP43652 599 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 RAB27AP51159 221 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 SNRPFP62306 86 aaKnown RBP9.09□□□□□ -0.95
USP54-212ENST00000480210 ASIC1P78348 528 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 GTF2BQ00403 316 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 NFX1Q12986 1120 aaKnown RBP9.09□□□□□ -0.95
USP54-212ENST00000480210 KCNB1Q14721 858 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 GPNMBQ14956 572 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 CATSPER4Q7RTX7 472 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 ZNF720Q7Z2F6 126 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 DEFB128Q7Z7B8 93 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 DBF4BQ8NFT6 615 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 LRRC15Q8TF66 581 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 ZBTB10Q96DT7 871 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 GSDMAQ96QA5 445 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 GOLPH3LQ9H4A5 285 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 ELAC1Q9H777 363 aaKnown RBP9.09□□□□□ -0.95
USP54-212ENST00000480210 TMEM206Q9H813 350 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 GPRC5CQ9NQ84 441 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 RMND1Q9NWS8 449 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 NOC2LQ9Y3T9 749 aaKnown RBP9.09□□□□□ -0.95
USP54-212ENST00000480210 DNAH12Q6ZR08 3092 aa9.09□□□□□ -0.95
USP54-212ENST00000480210 UBE4BO95155 1302 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 FSD2A1L4K1 749 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 N4BP3O15049 544 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 EIF3DO15371 548 aaKnown RBP eCLIP9.08□□□□□ -0.96
USP54-212ENST00000480210 ZNF623O75123 536 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 GADD45BO75293 160 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms