RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 HEATR6Q6AI08 1181 aaKnown RBP13.66□□□□□ -0.22
USP11-208ENST00000480104 MTSS1LQ765P7 747 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 PNMA1Q8ND90 353 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 NT5C3AQ9H0P0 336 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 HEBP1Q9NRV9 189 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 MRPL17Q9NRX2 175 aaKnown RBP13.66□□□□□ -0.22
USP11-208ENST00000480104 ECHDC1Q9NTX5 307 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 DPP7Q9UHL4 492 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 CDH7Q9ULB5 785 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 NEUROG3Q9Y4Z2 214 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
USP11-208ENST00000480104 TEX28O15482 410 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 HYAL3O43820 417 aaPredicted RBP13.65□□□□□ -0.22
USP11-208ENST00000480104 ADH1AP07327 375 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 SPATA31D3P0C874 917 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 KLRC1P26715 233 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 SLC11A1P49279 550 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 CRYBB1P53674 252 aaPredicted RBP13.65□□□□□ -0.22
USP11-208ENST00000480104 AK2P54819 239 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 VPS53Q5VIR6 699 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 SPATA31D4Q6ZUB0 917 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 ZKSCAN3Q9BRR0 538 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 IER2Q9BTL4 223 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 PKD2L1Q9P0L9 805 aa13.65□□□□□ -0.22
USP11-208ENST00000480104 CACNA1EQ15878 2313 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 TRIM6-TRIM34B2RNG4 842 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 B4GALT3O60512 393 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 EPN2O95208 641 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 CXCL12P48061 93 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 ZMYM1Q5SVZ6 1142 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 TCEAL6Q6IPX3 200 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 NLRX1Q86UT6 975 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 LONP2Q86WA8 852 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 TNPO1Q92973 898 aaKnown RBP13.64□□□□□ -0.23
USP11-208ENST00000480104 TCEAL3Q969E4 200 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 PHF20Q9BVI0 1012 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 GBP3Q9H0R5 595 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 AZI2Q9H6S1 392 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 DNAJB4Q9UDY4 337 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 KLK13Q9UKR3 277 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 MSRB2Q9Y3D2 182 aa13.64□□□□□ -0.23
USP11-208ENST00000480104 A0A0U1RQF3 1178 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 CARNS1A5YM72 827 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 VTNP04004 478 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 PARP1P09874 1014 aaKnown RBP13.63□□□□□ -0.23
USP11-208ENST00000480104 ZSCAN20P17040 1043 aaPredicted RBP13.63□□□□□ -0.23
USP11-208ENST00000480104 C19orf57Q0VDD7 668 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 TROAPQ12815 778 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 PLA2G2CQ5R387 149 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 PCNX4Q63HM2 1172 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 LARP1BQ659C4 914 aaKnown RBP13.63□□□□□ -0.23
USP11-208ENST00000480104 SIRT2Q8IXJ6 389 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 RPS6KC1Q96S38 1066 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 EDEM2Q9BV94 578 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 TBC1D13Q9NVG8 400 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 ZDHHC7Q9NXF8 308 aa13.63□□□□□ -0.23
USP11-208ENST00000480104 TEX15Q9BXT5 2789 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 C4orf47A7E2U8 309 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 ZBTB5O15062 677 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 ANP32CO43423 234 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 SMARCA5O60264 1052 aaPredicted RBP13.62□□□□□ -0.23
USP11-208ENST00000480104 GPR32O75388 356 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 PRB1P04280 392 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 URODP06132 367 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 NTHL1P78549 312 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 FGF13Q92913 245 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 MTMR8Q96EF0 704 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 LOXL4Q96JB6 756 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 ADAMTS10Q9H324 1103 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 KAT14Q9H8E8 782 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 INPP5FQ9Y2H2 1132 aa13.62□□□□□ -0.23
USP11-208ENST00000480104 K7ESF4 209 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 HMMRO75330 724 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 SEC24BO95487 1268 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 CAPNS1P04632 268 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 CEACAM1P13688 526 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 PLA2G2AP14555 144 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 MPLP40238 635 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 RNASELQ05823 741 aaKnown RBP13.61□□□□□ -0.23
USP11-208ENST00000480104 GAS6Q14393 721 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 GRASPQ7Z6J2 395 aaPredicted RBP13.61□□□□□ -0.23
USP11-208ENST00000480104 DGKHQ86XP1 1220 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 STAG2Q8N3U4 1231 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 GPRASP2Q96D09 838 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 HNRNPABQ99729 332 aaKnown RBP13.61□□□□□ -0.23
USP11-208ENST00000480104 PLEKHA4Q9H4M7 779 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 LMAN1LQ9HAT1 526 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 STK39Q9UEW8 545 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 PTPN13Q12923 2485 aa13.61□□□□□ -0.23
USP11-208ENST00000480104 HOXC13P31276 330 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 RAP1GAPP47736 663 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 HAND2P61296 217 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 NOMO2Q5JPE7 1267 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 DAB2IPQ5VWQ8 1189 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 PALB2Q86YC2 1186 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 HOMER1Q86YM7 354 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 ITFG1Q8TB96 612 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms