RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 STARD7Q9NQZ5 370 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 SH2B1Q9NRF2 756 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 ZHX1Q9UKY1 873 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 TBX21Q9UL17 535 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 PLXNB2O15031 1838 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 TNRC18O15417 2968 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 NFASCO94856 1347 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 TMEM265A0A087WTH1 108 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CYP3A7-CYP3A51PA0A087WV96 503 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 DCDC2CA8MYV0 355 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 F8W735 103 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 STXBP3O00186 592 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 HAS3O00219 553 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 MEIS1O00470 390 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 ADCY6O43306 1168 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 DYRK3O43781 588 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 PFKFB2O60825 505 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 PLEKHA8P1O95397 391 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CFBP00751 764 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CD4P01730 458 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 TXNP10599 105 aaKnown RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CASTP20810 708 aaKnown RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CYP3A7P24462 503 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 ITGB7P26010 798 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CDC25BP30305 580 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CD68P34810 354 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 ADCYAP1R1P41586 468 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 USP11P51784 963 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 MRPS9P82933 396 aaKnown RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 FGD1P98174 961 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 SETQ01105 290 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 ARHGAP1Q07960 439 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 TOB2Q14106 344 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 KCNA10Q16322 511 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 PKN1Q16512 942 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 DGKDQ16760 1214 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 LRRC26Q2I0M4 334 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 USH1GQ495M9 461 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 PRAMEF19Q5SWL8 479 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CELF3Q5SZQ8 465 aaKnown RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 XP32Q5T750 250 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 FAM109BQ6ICB4 259 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CHST3Q7LGC8 479 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 NLRX1Q86UT6 975 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 FAM126BQ8IXS8 530 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 KLHL23Q8NBE8 558 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 CAGE1Q8TC20 777 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 DIS3LQ8TF46 1054 aaKnown RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 MEGF10Q96KG7 1140 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 TAAR1Q96RJ0 339 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 LLPHQ9BRT6 129 aaKnown RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 MTG1Q9BT17 334 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 BHLHE41Q9C0J9 482 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 SENP6Q9GZR1 1112 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 SEMA6BQ9H3T3 888 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 AKTIPQ9H8T0 292 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 JADE2Q9NQC1 790 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 LATS2Q9NRM7 1088 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 ISY1Q9ULR0 285 aaKnown RBP5.59□□□□□ -1.51
PTCD3-213ENST00000480102 SOX13Q9UN79 622 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 UBIAD1Q9Y5Z9 338 aa5.59□□□□□ -1.51
PTCD3-213ENST00000480102 PARP14Q460N5 1801 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 H0YGN5 161 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 TLR3O15455 904 aaKnown RBP5.58□□□□□ -1.52
PTCD3-213ENST00000480102 PGK1P00558 417 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 TIMP1P01033 207 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 MMP3P08254 477 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 CLTBP09497 229 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 H2AFB1P0C5Y9 115 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 H2AFB2P0C5Z0 115 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 C6orf222P0C671 652 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-213ENST00000480102 XBP1P17861 261 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 RFC2P35250 354 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 MCM2P49736 904 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 RTP1P59025 263 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 FAAP100Q0VG06 881 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 ORC2Q13416 577 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-213ENST00000480102 ITGA7Q13683 1181 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 CEP55Q53EZ4 464 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 GJC2Q5T442 439 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-213ENST00000480102 WWC2Q6AWC2 1192 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 PPP4R3AQ6IN85 833 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.58□□□□□ -1.52
PTCD3-213ENST00000480102 HOMER1Q86YM7 354 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 FBXO16Q8IX29 292 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-213ENST00000480102 SMARCC2Q8TAQ2 1214 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 BSNDQ8WZ55 320 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 WASF1Q92558 559 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 TBC1D5Q92609 795 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 DPF3Q92784 378 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 WNT8BQ93098 351 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 NXPE3Q969Y0 559 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 TP53INP1Q96A56 240 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 MBOAT7Q96N66 472 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 RIT2Q99578 217 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 NAP1L4Q99733 375 aaKnown RBP5.58□□□□□ -1.52
PTCD3-213ENST00000480102 CPVLQ9H3G5 476 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 VAT1LQ9HCJ6 419 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 C6orf50Q9HD87 102 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 PDLIM7Q9NR12 457 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms