RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 SCP2P22307 547 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 ABCD1P33897 745 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 NCBP1Q09161 790 aaKnown RBP12.34□□□□□ -0.43
CLDN11-205ENST00000480067 PSMD2Q13200 908 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 KMT5BQ4FZB7 885 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 TRAF7Q6Q0C0 670 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 ZNF720Q7Z2F6 126 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 SRGAP1Q7Z6B7 1085 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 TMEM199Q8N511 208 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 USP38Q8NB14 1042 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 SPATA20Q8TB22 786 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 HPS3Q969F9 1004 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 DENND3A2RUS2 1198 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 K7ENM7 598 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 GPR182O15218 404 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 RHOBTB3O94955 611 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 GCNT3O95395 438 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 GHRP10912 638 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 SFPQP23246 707 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLDN11-205ENST00000480067 ITGB8P26012 769 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 NMT1P30419 496 aaKnown RBP12.33□□□□□ -0.44
CLDN11-205ENST00000480067 NCKAP1LP55160 1127 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 STRN3Q13033 797 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 KCNB1Q14721 858 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 MAPK6Q16659 721 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 FBXO47Q5MNV8 452 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 FAM26FQ5R3K3 315 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 CCDC183Q5T5S1 534 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 CDCA2Q69YH5 1023 aaPredicted RBP12.33□□□□□ -0.44
CLDN11-205ENST00000480067 MFSD5Q6N075 450 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 CAVIN1Q6NZI2 390 aaKnown RBP12.33□□□□□ -0.44
CLDN11-205ENST00000480067 STXBP4Q6ZWJ1 553 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 HAUS6Q7Z4H7 955 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.44
CLDN11-205ENST00000480067 TMEM161BQ8NDZ6 487 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 TMEM40Q8WWA1 233 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 SCLYQ96I15 445 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 WNT8AQ9H1J5 351 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 SLC39A2Q9NP94 309 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 ARHGAP28Q9P2N2 729 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 SQORQ9Y6N5 450 aa12.33□□□□□ -0.44
CLDN11-205ENST00000480067 EVPLQ92817 2033 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 ARID2Q68CP9 1835 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 PHLPP2Q6ZVD8 1323 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 ADGRA3Q8IWK6 1321 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 ERLIN2O94905 339 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 SYN1P17600 705 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 SARSP49591 514 aaKnown RBP12.32□□□□□ -0.44
CLDN11-205ENST00000480067 MBTD1Q05BQ5 628 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 EHHADHQ08426 723 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 NFX1Q12986 1120 aaKnown RBP12.32□□□□□ -0.44
CLDN11-205ENST00000480067 LPIN1Q14693 890 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 MBTPS1Q14703 1052 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 PCBP1Q15365 356 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLDN11-205ENST00000480067 NT5DC1Q5TFE4 455 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 TSHZ1Q6ZSZ6 1077 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 CATSPER4Q7RTX7 472 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 FIZ1Q96SL8 496 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 LBHD1Q9BQE6 289 aaPredicted RBP12.32□□□□□ -0.44
CLDN11-205ENST00000480067 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
CLDN11-205ENST00000480067 ST6GALNAC4Q9H4F1 302 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 MINDY3Q9H8M7 445 aa12.32□□□□□ -0.44
CLDN11-205ENST00000480067 ZMYND8Q9ULU4 1186 aaPredicted RBP12.32□□□□□ -0.44
CLDN11-205ENST00000480067 NOC2LQ9Y3T9 749 aaKnown RBP12.32□□□□□ -0.44
CLDN11-205ENST00000480067 BIN1O00499 593 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 NBNO60934 754 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 FGFR4P22455 802 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 RFC2P35250 354 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 RGS19P49795 217 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 GTF2BQ00403 316 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 STK4Q13043 487 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 PAK2Q13177 524 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 ALCAMQ13740 583 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 TMEM132AQ24JP5 1023 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 ZC2HC1CQ53FD0 456 aaPredicted RBP12.31□□□□□ -0.44
CLDN11-205ENST00000480067 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 DEFB128Q7Z7B8 93 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 RPUSD2Q8IZ73 545 aaKnown RBP12.31□□□□□ -0.44
CLDN11-205ENST00000480067 BADQ92934 168 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 IFIH1Q9BYX4 1025 aaKnown RBP12.31□□□□□ -0.44
CLDN11-205ENST00000480067 FZD8Q9H461 694 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 AGO3Q9H9G7 860 aaKnown RBP12.31□□□□□ -0.44
CLDN11-205ENST00000480067 PRMT7Q9NVM4 692 aaPredicted RBP12.31□□□□□ -0.44
CLDN11-205ENST00000480067 TMEM63CQ9P1W3 806 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 PADI3Q9ULW8 664 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 TBX20Q9UMR3 447 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 ST3GAL5Q9UNP4 418 aa12.31□□□□□ -0.44
CLDN11-205ENST00000480067 ACKR2O00590 384 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 PRKCBP05771 671 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 MYBP10242 640 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 CSF2RAP15509 400 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 CD52P31358 61 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 CASP5P51878 434 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 PRPF4BQ13523 1007 aaKnown RBP12.3□□□□□ -0.44
CLDN11-205ENST00000480067 GPNMBQ14956 572 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms