RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 MCTP2Q6DN12 878 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 NYAP1Q6ZVC0 841 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 NIPA1Q7RTP0 329 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 TEX2Q8IWB9 1127 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 TMEM87AQ8NBN3 555 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 NKD2Q969F2 451 aaPredicted RBP11.69□□□□□ -0.54
SMURF1-204ENST00000480055 TCEANC2Q96MN5 208 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 ZNF558Q96NG5 402 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 MAP7D2Q96T17 732 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 ESYT1Q9BSJ8 1104 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 REPIN1Q9BWE0 567 aaKnown RBP11.69□□□□□ -0.54
SMURF1-204ENST00000480055 TMEM117Q9H0C3 514 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 SMOC2Q9H3U7 446 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
SMURF1-204ENST00000480055 TBC1D22BQ9NU19 505 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 GABBR1Q9UBS5 961 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 CEP131Q9UPN4 1083 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 HCFC2Q9Y5Z7 792 aa11.69□□□□□ -0.54
SMURF1-204ENST00000480055 DMXL1Q9Y485 3027 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 KLF18A0A0U1RQI7 1052 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 ZBTB42B2RXF5 422 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 GPR32O75388 356 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 ATP4AP20648 1035 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 PBX3P40426 434 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 CLCN3P51790 818 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 NLRP11P59045 1033 aaKnown RBP11.68□□□□□ -0.54
SMURF1-204ENST00000480055 FAM189BP81408 668 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 DSC3Q14574 896 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 BMS1Q14692 1282 aaKnown RBP11.68□□□□□ -0.54
SMURF1-204ENST00000480055 KMT5BQ4FZB7 885 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 CES5AQ6NT32 575 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 EFCAB12Q6NXP0 572 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 KCNT2Q6UVM3 1135 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 LRRC55Q6ZSA7 311 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 FRMD5Q7Z6J6 570 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 LRRC43Q8N309 656 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 ZNF668Q96K58 619 aaPredicted RBP11.68□□□□□ -0.54
SMURF1-204ENST00000480055 CASD1Q96PB1 797 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 PRR14Q9BWN1 585 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 ADAM7Q9H2U9 754 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 RNF19AQ9NV58 838 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 SPG21Q9NZD8 308 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 BRPF3Q9ULD4 1205 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 PCDHA10Q9Y5I2 948 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 EP300Q09472 2414 aaPredicted RBP11.68□□□□□ -0.54
SMURF1-204ENST00000480055 WDR87Q6ZQQ6 2873 aa11.68□□□□□ -0.54
SMURF1-204ENST00000480055 MAGEB2O15479 319 aa11.67□□□□□ -0.54
SMURF1-204ENST00000480055 DHX15O43143 795 aaKnown RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 MTHFRP42898 656 aa11.67□□□□□ -0.54
SMURF1-204ENST00000480055 ID4P47928 161 aa11.67□□□□□ -0.54
SMURF1-204ENST00000480055 CLK2P49760 499 aaKnown RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 CLCN5P51795 746 aa11.67□□□□□ -0.54
SMURF1-204ENST00000480055 SETQ01105 290 aaPredicted RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 SMC1AQ14683 1233 aaKnown RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 PRR16Q569H4 304 aa11.67□□□□□ -0.54
SMURF1-204ENST00000480055 CWF19L1Q69YN2 538 aaKnown RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 ZNF746Q6NUN9 644 aaPredicted RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 DHX32Q7L7V1 743 aaKnown RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 SMAP1Q8IYB5 467 aaPredicted RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 ZDHHC14Q8IZN3 488 aa11.67□□□□□ -0.54
SMURF1-204ENST00000480055 LRRC71Q8N4P6 559 aa11.67□□□□□ -0.54
SMURF1-204ENST00000480055 TDRD5Q8NAT2 981 aaKnown RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 C6orf50Q9HD87 102 aa11.67□□□□□ -0.54
SMURF1-204ENST00000480055 NRBP2Q9NSY0 501 aa11.67□□□□□ -0.54
SMURF1-204ENST00000480055 MAFBQ9Y5Q3 323 aaPredicted RBP11.67□□□□□ -0.54
SMURF1-204ENST00000480055 PATJQ8NI35 1801 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 IGLV3-22A0A075B6J6 115 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 C2orf71A6NGG8 1288 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 CLASP2O75122 1294 aaKnown RBP11.66□□□□□ -0.54
SMURF1-204ENST00000480055 ASGR2P07307 311 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 CFHP08603 1231 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 CYP3A4P08684 503 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 EIF4BP23588 611 aaKnown RBP11.66□□□□□ -0.54
SMURF1-204ENST00000480055 ALDH7A1P49419 539 aaKnown RBP11.66□□□□□ -0.54
SMURF1-204ENST00000480055 KIAA1841Q6NSI8 718 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 ECHDC2Q86YB7 292 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 REXO1Q8N1G1 1221 aaKnown RBP11.66□□□□□ -0.54
SMURF1-204ENST00000480055 SLC39A11Q8N1S5 342 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 MRPL43Q8N983 215 aaKnown RBP11.66□□□□□ -0.54
SMURF1-204ENST00000480055 HELQQ8TDG4 1101 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 CCDC12Q8WUD4 166 aaPredicted RBP11.66□□□□□ -0.54
SMURF1-204ENST00000480055 FAM167AQ96KS9 214 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 PPP4R2Q9NY27 417 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 USTQ9Y2C2 406 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 TDRD15B5MCY1 1934 aaKnown RBP11.66□□□□□ -0.54
SMURF1-204ENST00000480055 MYH15Q9Y2K3 1946 aa11.66□□□□□ -0.54
SMURF1-204ENST00000480055 OTOGLQ3ZCN5 2332 aa11.65□□□□□ -0.54
SMURF1-204ENST00000480055 CCDC196A0A1B0GTZ2 297 aa11.65□□□□□ -0.54
SMURF1-204ENST00000480055 WDR64B1ANS9 1081 aa11.65□□□□□ -0.54
SMURF1-204ENST00000480055 NT5C1B-RDH14C9J2C7 533 aa11.65□□□□□ -0.54
SMURF1-204ENST00000480055 CHMP2AO43633 222 aa11.65□□□□□ -0.54
SMURF1-204ENST00000480055 CXCL14O95715 111 aa11.65□□□□□ -0.54
SMURF1-204ENST00000480055 FGFR4P22455 802 aa11.65□□□□□ -0.54
SMURF1-204ENST00000480055 CDC27P30260 824 aa11.65□□□□□ -0.54
SMURF1-204ENST00000480055 METAP2P50579 478 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMURF1-204ENST00000480055 EXOSC10Q01780 885 aaKnown RBP11.65□□□□□ -0.54
SMURF1-204ENST00000480055 AKAP17AQ02040 695 aaKnown RBP11.65□□□□□ -0.54
SMURF1-204ENST00000480055 FUT2Q10981 343 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms