RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 PQBP1O60828 265 aaKnown RBP10.61□□□□□ -0.71
CD46-214ENST00000480003 KINO60870 393 aaKnown RBP10.61□□□□□ -0.71
CD46-214ENST00000480003 CAND2O75155 1236 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 CHRNA1P02708 482 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 GPC3P51654 580 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 PTENP60484 403 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 MGAT3Q09327 533 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 RAD51AP2Q09MP3 1159 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 LAMTOR4Q0VGL1 99 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 GPNMBQ14956 572 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 POSTNQ15063 836 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 KLHL40Q2TBA0 621 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 HABP4Q5JVS0 413 aaKnown RBP10.61□□□□□ -0.71
CD46-214ENST00000480003 NT5DC1Q5TFE4 455 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 UNC13DQ70J99 1090 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 KSR1Q8IVT5 923 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 CAGE1Q8TC20 777 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 SPIRE2Q8WWL2 714 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 PSPC1Q8WXF1 523 aaKnown RBP10.61□□□□□ -0.71
CD46-214ENST00000480003 DRC1Q96MC2 740 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 NOC4LQ9BVI4 516 aaKnown RBP10.61□□□□□ -0.71
CD46-214ENST00000480003 STRA6Q9BX79 667 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 POLR3FQ9H1D9 316 aaPredicted RBP10.61□□□□□ -0.71
CD46-214ENST00000480003 IFT122Q9HBG6 1241 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 NPDC1Q9NQX5 325 aaPredicted RBP10.61□□□□□ -0.71
CD46-214ENST00000480003 PANK4Q9NVE7 773 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 KCNG1Q9UIX4 513 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 TBX21Q9UL17 535 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 ATP11BQ9Y2G3 1177 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 PCDHA5Q9Y5H7 936 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 COL4A3BPQ9Y5P4 624 aa10.61□□□□□ -0.71
CD46-214ENST00000480003 TRIM43BA6NCK2 446 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 KIAA0355O15063 1070 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 VTNP04004 478 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 MAPTP10636 758 aaKnown RBP10.6□□□□□ -0.71
CD46-214ENST00000480003 CKBP12277 381 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 PLS3P13797 630 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 NPTX2P47972 431 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 NLRP11P59045 1033 aaKnown RBP10.6□□□□□ -0.71
CD46-214ENST00000480003 PNOCQ13519 176 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 SKOR2Q2VWA4 1001 aaPredicted RBP10.6□□□□□ -0.71
CD46-214ENST00000480003 ZNF618Q5T7W0 954 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 RBM43Q6ZSC3 357 aaKnown RBP10.6□□□□□ -0.71
CD46-214ENST00000480003 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 RSPH3Q86UC2 560 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 RHPN2Q8IUC4 686 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 TRIM43Q96BQ3 446 aaPredicted RBP10.6□□□□□ -0.71
CD46-214ENST00000480003 CCDC34Q96HJ3 373 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 MAP7D2Q96T17 732 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 NFKBIZQ9BYH8 718 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 CELF4Q9BZC1 486 aaKnown RBP10.6□□□□□ -0.71
CD46-214ENST00000480003 FAM49AQ9H0Q0 323 aaPredicted RBP10.6□□□□□ -0.71
CD46-214ENST00000480003 PARVGQ9HBI0 331 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 TMEM63CQ9P1W3 806 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 LARSQ9P2J5 1176 aaKnown RBP10.6□□□□□ -0.71
CD46-214ENST00000480003 NOD1Q9Y239 953 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 AKT3Q9Y243 479 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 SQORQ9Y6N5 450 aa10.6□□□□□ -0.71
CD46-214ENST00000480003 TNRC18O15417 2968 aaPredicted RBP10.59□□□□□ -0.71
CD46-214ENST00000480003 A0A087WZ62 844 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 TRAK2O60296 914 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 RHOBTB3O94955 611 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 FAM13AO94988 1023 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 RPN1P04843 607 aaKnown RBP10.59□□□□□ -0.71
CD46-214ENST00000480003 KRT18P05783 430 aaKnown RBP10.59□□□□□ -0.71
CD46-214ENST00000480003 CLTBP09497 229 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 GAP43P17677 238 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 ITGB8P26012 769 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 THPOP40225 353 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 NAMPTP43490 491 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 CRYBB1P53674 252 aaPredicted RBP10.59□□□□□ -0.71
CD46-214ENST00000480003 PEX3P56589 373 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 ASIC1P78348 528 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 MRPS6P82932 125 aaKnown RBP10.59□□□□□ -0.71
CD46-214ENST00000480003 COASYQ13057 564 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 PSMD2Q13200 908 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 BFSP2Q13515 415 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 CAPSQ13938 189 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 KCNB1Q14721 858 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 PPP2R5AQ15172 486 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 CAMK4Q16566 473 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 KMT5BQ4FZB7 885 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 HERC4Q5GLZ8 1057 aaPredicted RBP10.59□□□□□ -0.71
CD46-214ENST00000480003 ZNF410Q86VK4 478 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 CCDC65Q8IXS2 484 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 MYCT1Q8N699 235 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 TMEM161BQ8NDZ6 487 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 ERCC4Q92889 916 aaPredicted RBP10.59□□□□□ -0.71
CD46-214ENST00000480003 TATDN2Q93075 761 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 VWCEQ96DN2 955 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 IFT74Q96LB3 600 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 FDXACB1Q9BRP7 624 aaPredicted RBP10.59□□□□□ -0.71
CD46-214ENST00000480003 OSBPL7Q9BZF2 842 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 ST6GALNAC4Q9H4F1 302 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 TMEM39AQ9NV64 488 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 ARHGAP28Q9P2N2 729 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 SEL1LQ9UBV2 794 aa10.59□□□□□ -0.71
CD46-214ENST00000480003 HOOK1Q9UJC3 728 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms