RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 RPL13P26373 211 aaKnown RBP22.34■■□□□ 1.17
COL13A1-208ENST00000479733 BHMT2Q9H2M3 363 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 USP40Q9NVE5 1235 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 CTNNAL1Q9UBT7 734 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 hCG_1984214I3L0E3 225 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 KCNQ2O43526 872 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 COPS2P61201 443 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 NFIXQ14938 502 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 ASPRV1Q53RT3 343 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 TAOK1Q7L7X3 1001 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 ZNF713Q8N859 430 aaPredicted RBP22.34■■□□□ 1.17
COL13A1-208ENST00000479733 RDH13Q8NBN7 331 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 ARHGEF2Q92974 986 aaKnown RBP22.34■■□□□ 1.17
COL13A1-208ENST00000479733 KIF9Q9HAQ2 790 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 METTL14Q9HCE5 456 aaKnown RBP22.34■■□□□ 1.17
COL13A1-208ENST00000479733 PHF2O75151 1096 aa22.33■■□□□ 1.17
COL13A1-208ENST00000479733 GH1P01241 217 aa22.33■■□□□ 1.17
COL13A1-208ENST00000479733 POLD1P28340 1107 aa22.33■■□□□ 1.17
COL13A1-208ENST00000479733 CLK2P49760 499 aaKnown RBP22.33■■□□□ 1.17
COL13A1-208ENST00000479733 MESDQ14696 234 aa22.33■■□□□ 1.17
COL13A1-208ENST00000479733 COG2Q14746 738 aa22.33■■□□□ 1.17
COL13A1-208ENST00000479733 ZC2HC1CQ53FD0 456 aaPredicted RBP22.33■■□□□ 1.17
COL13A1-208ENST00000479733 ZNF746Q6NUN9 644 aaPredicted RBP22.33■■□□□ 1.17
COL13A1-208ENST00000479733 SUN1O94901 812 aa22.33■■□□□ 1.16
COL13A1-208ENST00000479733 NT5C2P49902 561 aa22.33■■□□□ 1.16
COL13A1-208ENST00000479733 CPNE8Q86YQ8 564 aa22.33■■□□□ 1.16
COL13A1-208ENST00000479733 FAM186BQ8IYM0 893 aa22.33■■□□□ 1.16
COL13A1-208ENST00000479733 FITM2Q8N6M3 262 aa22.33■■□□□ 1.16
COL13A1-208ENST00000479733 CCHCR1Q8TD31 782 aa22.33■■□□□ 1.16
COL13A1-208ENST00000479733 RUSC1Q9BVN2 902 aa22.33■■□□□ 1.16
COL13A1-208ENST00000479733 TYW1Q9NV66 732 aaKnown RBP22.33■■□□□ 1.16
COL13A1-208ENST00000479733 SLURP2P0DP57 97 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 SLC30A10Q6XR72 485 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 SEPT14Q6ZU15 432 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 SETDB2Q96T68 719 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 HOMER3Q9NSC5 361 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 PITPNM2Q9BZ72 1349 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 PPP2R5EQ16537 467 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 TBC1D22AQ8WUA7 517 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 SLC20A1Q8WUM9 679 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 ARHGEF10LQ9HCE6 1279 aa22.32■■□□□ 1.16
COL13A1-208ENST00000479733 NCANO14594 1321 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 ANXA13P27216 316 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 NMT1P30419 496 aaKnown RBP22.31■■□□□ 1.16
COL13A1-208ENST00000479733 CYP2J2P51589 502 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 CBWD6Q4V339 395 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 CBWD3Q5JTY5 395 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 CBWD5Q5RIA9 395 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 STK33Q9BYT3 514 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 CNOT7Q9UIV1 285 aaKnown RBP22.31■■□□□ 1.16
COL13A1-208ENST00000479733 ENO4A6NNW6 628 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 ATMINO43313 823 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-208ENST00000479733 TBCAO75347 108 aaKnown RBP22.31■■□□□ 1.16
COL13A1-208ENST00000479733 MSH2P43246 934 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 TNIP1Q15025 636 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 EPM2AIP1Q7L775 607 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-208ENST00000479733 RMDN2Q96LZ7 410 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 STMN4Q9H169 189 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-208ENST00000479733 CCDC134Q9H6E4 229 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 TBK1Q9UHD2 729 aa22.31■■□□□ 1.16
COL13A1-208ENST00000479733 DIS3Q9Y2L1 958 aaKnown RBP22.31■■□□□ 1.16
COL13A1-208ENST00000479733 CHRNA3P32297 505 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 ZNF543Q08ER8 600 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 CAPRIN2Q6IMN6 1127 aaKnown RBP22.3■■□□□ 1.16
COL13A1-208ENST00000479733 SLC17A8Q8NDX2 589 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 PFASO15067 1338 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 MPHOSPH10O00566 681 aaKnown RBP22.3■■□□□ 1.16
COL13A1-208ENST00000479733 DRG2P55039 364 aaKnown RBP22.3■■□□□ 1.16
COL13A1-208ENST00000479733 SNAP25P60880 206 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 BNIP1Q12981 228 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 DDB1Q16531 1140 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 TRIM68Q6AZZ1 485 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 PIGOQ8TEQ8 1089 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 BTBD6Q96KE9 485 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 FOXN3O00409 490 aaPredicted RBP22.3■■□□□ 1.16
COL13A1-208ENST00000479733 TGFB1I1O43294 461 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 FTLP02792 175 aaPredicted RBP22.3■■□□□ 1.16
COL13A1-208ENST00000479733 SPATA31C1P0DKV0 1188 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 CCND1P24385 295 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 CTTNQ14247 550 aaKnown RBP22.3■■□□□ 1.16
COL13A1-208ENST00000479733 SLC10A5Q5PT55 438 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 SPATA21Q7Z572 469 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 BATF3Q9NR55 127 aa22.3■■□□□ 1.16
COL13A1-208ENST00000479733 PYGMP11217 842 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 RARGP13631 454 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 FMO5P49326 533 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 UBL4BQ8N7F7 174 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 SYT2Q8N9I0 419 aaPredicted RBP22.29■■□□□ 1.16
COL13A1-208ENST00000479733 RGL1Q9NZL6 768 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 COMTP21964 271 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 SNX1Q13596 522 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 GALNTL6Q49A17 601 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 LINC00116Q8NCU8 138 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 ANO3Q9BYT9 981 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 GPR88Q9GZN0 384 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 CDC42EP4Q9H3Q1 356 aaKnown RBP22.29■■□□□ 1.16
COL13A1-208ENST00000479733 SLC5A4Q9NY91 659 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 ADAM22Q9P0K1 906 aa22.29■■□□□ 1.16
COL13A1-208ENST00000479733 EME2A4GXA9 379 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-208ENST00000479733 ANKRD62A6NC57 917 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms